8FO1 | pdb_00008fo1

Cryo-EM structure of Cryptococcus neoformans trehalose-6-phosphate synthase homotetramer in apo form

PDB DOI: https://doi.org/10.2210/pdb8FO1/pdb
EM Map EMD-29338: EMDB EMDataResource

Classification: TRANSFERASE
Organism(s): Cryptococcus neoformans H99
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2022-12-29 Released: 2024-01-10
Deposition Author(s): Washington, E.J., Brennan, R.G.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM structure of Cryptococcus neoformans trehalose-6-phosphate synthase homotetramer in apo form

Washington, E.J., Brennan, R.G.

To be published.

Macromolecule Content

Total Structure Weight: 307.26 kDa
Atom Count: 12,341
Modeled Residue Count: 1,596
Deposited Residue Count: 2,772
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Alpha,alpha-trehalose-phosphate synthase (UDP-forming)	A, B, C, D	693	Cryptococcus neoformans H99	Mutation(s): 0 Gene Names: CNAG_05292 EC: 2.4.1.15
UniProt
Find proteins for J9VJZ1 (Cryptococcus neoformans (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487)) Explore J9VJZ1 Go to UniProtKB: J9VJZ1
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	J9VJZ1
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-01-10

Deposition Author(s):

Washington, E.J.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	AI104533-01A1

Revision History (Full details and data files)

Version 1.0: 2024-01-10
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.