Crystal structure of Scribble PDZ1 with human papillomavirus strain 16 E6 peptide
Stewart, B.Z., Caria, S., Humbert, P.O., Kvansakul, M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein scribble homolog | A [auth B], B [auth A] | 96 | Homo sapiens | Mutation(s): 0  Gene Names: SCRIB, CRIB1, KIAA0147, LAP4, SCRB1, VARTUL | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q14160 (Homo sapiens) Explore Q14160  Go to UniProtKB:  Q14160 | |||||
PHAROS:  Q14160 GTEx:  ENSG00000180900  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q14160 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Protein E6 | 10 | human papillomavirus 66 | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for Q80955 (Human papillomavirus 66) Explore Q80955  Go to UniProtKB:  Q80955 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q80955 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | E [auth B], F [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 64.091 | α = 90 |
b = 90.992 | β = 91.93 |
c = 36.356 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Health and Medical Research Council (NHMRC, Australia) | Australia | APP1103871 |
Australian Research Council (ARC) | Australia | FT130101349 |