Download MendeleyAbundant A beta fibrils in ultracentrifugal supernatants of aqueous extracts from Alzheimer's disease brains
Stern, A.M., Yang, Y., Meunier, A.L., Liu, W., Cai, Y., Ericsson, M., Liu, L., Goedert, M., Scheres, S.H.W., Selkoe, D.J.(2022) Biorxiv
8AZT
Type II amyloid-beta 42 filaments from high-spin supernatants of aqueous extracts from Alzheimer's disease brains | ABeta42
- PDB DOI: 10.2210/pdb8AZT/pdb
- EM Map EMD-15771: EMDB EMDataResource
- Classification: PROTEIN FIBRIL
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 2022-09-06 Released: 2022-11-02
- Funding Organization(s): Medical Research Council (MRC, United Kingdom)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.70 Å
- Aggregation State: FILAMENT
- Reconstruction Method: HELICAL
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Amyloid-beta precursor protein | A [auth B] | 42 | Homo sapiens | Mutation(s): 0 Gene Names: APP, A4, AD1 |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P05067 (Homo sapiens) Explore P05067 Go to UniProtKB: P05067 | |||||
PHAROS: P05067 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P05067 | ||||
Protein Feature ViewExpand | |||||
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Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.70 Å
- Aggregation State: FILAMENT
- Reconstruction Method: HELICAL
| Task | Software Package | Version |
|---|---|---|
| RECONSTRUCTION | RELION | |
| MODEL REFINEMENT | REFMAC |
Entry History & Funding Information
Deposition Data
- Released Date: 2022-11-02 Deposition Author(s): Yang, Y., Stern, M.A., Meunier, L.A., Liu, W., Cai, Y.Q., Ericsson, M., Liu, L., Selkoe, J.D., Goedert, M., Scheres, H.W.S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Medical Research Council (MRC, United Kingdom) | United Kingdom | MC_UP_1201/25 |
| Medical Research Council (MRC, United Kingdom) | United Kingdom | MC_UP_A025_1013 |
| Medical Research Council (MRC, United Kingdom) | United Kingdom | MC_U105184291 |
Revision History (Full details and data files)
- Version 1.0: 2022-11-02
Type: Initial release - Version 2.0: 2022-11-23
Type: Coordinate replacement
Reason: Model orientation/position
Changes: Atomic model, Data collection, Refinement description, Structure summary
