8AA8 | pdb_00008aa8

30S ribosomal protein S24e from Thermococcus barophilus

• PDB DOI: https://doi.org/10.2210/pdb8AA8/pdb

• Classification: GENE REGULATION
• Organism(s): Thermococcus barophilus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2022-06-30 Released: 2023-07-12 
• Deposition Author(s): Calio, A., Hoh, F.
• Funding Organization(s): Agence Nationale de la Recherche (ANR), Centre National de la Recherche Scientifique (CNRS)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.71 Å
• R-Value Free: 
  0.225 (Depositor), 0.240 (DCC) 
• R-Value Work: 
  0.186 (Depositor), 0.200 (DCC) 
• R-Value Observed: 
  0.188 (Depositor) 

Starting Model: experimental

Literature

30S ribosomal protein S24e from Thermococcus barophilus at 1.7A

Calio, A., Hoh, F.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 23.33 kDa 
• Atom Count: 1,395 
• Modeled Residue Count: 162 
• Deposited Residue Count: 198 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
30S ribosomal protein S24e	A, B	99	Thermococcus barophilus	Mutation(s): 0  Gene Names: rps24e, TBCH5v1_2408
UniProt
Find proteins for A0A0S1XER1 (Thermococcus barophilus) Explore A0A0S1XER1  Go to UniProtKB:  A0A0S1XER1

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.71 Å
• R-Value Free:  0.225 (Depositor), 0.240 (DCC) 
• R-Value Work:  0.186 (Depositor), 0.200 (DCC) 
• R-Value Observed: 0.188 (Depositor) 

Space Group: P 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 24.306	α = 91.36
b = 35.067	β = 89.95
c = 48.897	γ = 92.18

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2023-07-12 
Deposition Author(s): Calio, A., Hoh, F.

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Funding Organization	Location	Grant Number
Agence Nationale de la Recherche (ANR)	France	17-CE11-0012-01
Centre National de la Recherche Scientifique (CNRS)	France	MITI OriginsUnderPressure et LifeAdapt

Revision History  

• Version 1.0: 2023-07-12
  Type: Initial release
  
• Version 1.1: 2024-02-07
  Changes: Data collection, Refinement description