Structure determination of Pepper-Broccoli FRET pair by RNA origami scaffolding
McRae, E.K.S., Vallina, N.S., Hansen, B.K., Boussebayle, A., Andersen, E.S.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
brocolli-pepper aptamer | A [auth E] | 374 | synthetic construct | ||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
J93 (Subject of Investigation/LOI) Query on J93 | B [auth E] | 4-[(~{Z})-1-cyano-2-[5-[2-hydroxyethyl(methyl)amino]thieno[3,2-b]thiophen-2-yl]ethenyl]benzenecarbonitrile C19 H15 N3 O S2 RIGJCKIIBUZTCX-OVCLIPMQSA-N | |||
1TU (Subject of Investigation/LOI) Query on 1TU | C [auth E] | 4-(3,5-difluoro-4-hydroxybenzyl)-1,2-dimethyl-1H-imidazol-5-ol C12 H12 F2 N2 O2 MSZRPLCUVKFQJC-UHFFFAOYSA-N | |||
K Query on K | D [auth E] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | cryoSPARC | 3 |
MODEL REFINEMENT | PHENIX | |
MODEL REFINEMENT | ISOLDE |
Funding Organization | Location | Grant Number |
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Danish Council for Independent Research | Denmark | -- |