7XLM | pdb_00007xlm

Human diastrophic dysplasia sulfate transporter SLC26A2

PDB DOI: https://doi.org/10.2210/pdb7XLM/pdb
EM Map EMD-33284: EMDB EMDataResource

Classification: TRANSPORT PROTEIN
Organism(s): Homo sapiens
Expression System: Homo sapiens
Mutation(s): No
Membrane Protein: Yes OPM PDBTM MemProtMD

Deposited: 2022-04-22 Released: 2023-03-15
Deposition Author(s): Chi, X.M., Zhou, Q.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Validation slider image for 7XLM

This is version 1.2 of the entry. See complete history.

Literature

Structure of human diastrophic dysplasia sulfate transporter SLC26A2

Chi, X.M., Li, X.R., Huang, B.D., Zhou, Q.

(2023) Dian Zi Xian Wei Xue Bao 42

DOI: https://doi.org/10.3969/j.issn.1000-6281.2023.01.004

Macromolecule Content

Total Structure Weight: 176.74 kDa
Atom Count: 9,268
Modeled Residue Count: 1,190
Deposited Residue Count: 1,602
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Sulfate transporter	A, B	801	Homo sapiens	Mutation(s): 0 Gene Names: SLC26A2, DTD, DTDST Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for P50443 (Homo sapiens) Explore P50443 Go to UniProtKB: P50443
PHAROS: P50443 GTEx: ENSG00000155850
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	P50443
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 (Subject of Investigation/LOI) Query on SO4 Download:Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain D [auth B] MOL2 format, chain C [auth A] MOL2 format, chain D [auth B] mmCIF format, chain C [auth A] mmCIF format, chain D [auth B]	C [auth A], D [auth B]	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Interactions Focus chain C [auth A] Focus chain D [auth B] Interactions & Density Focus chain C [auth A] Focus chain D [auth B]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.73 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

View more in-depth experimental data

Entry History

& Funding Information

Deposition Data

Released Date: 2023-03-15

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31971123

Revision History (Full details and data files)

Version 1.0: 2023-03-15
Type: Initial release
Version 1.1: 2023-04-12
Changes: Database references
Version 1.2: 2024-07-03
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.