Effects of breast fibroepithelial tumor associated retinoic acid receptor alpha ligand binding domain mutations on receptor function and retinoid signaling
Huang, X.X., Ng, L.M., Teh, B.T.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Retinoic acid receptor alpha | 265 | Homo sapiens | Mutation(s): 1  Gene Names: RARA, NR1B1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P10276 (Homo sapiens) Explore P10276  Go to UniProtKB:  P10276 | |||||
PHAROS:  P10276 GTEx:  ENSG00000131759  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P10276 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by: Sequence | 3D Structure
Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Peptide from Nuclear receptor coactivator 1 | B [auth C] | 13 | Homo sapiens | Mutation(s): 0  EC: 2.3.1.48 | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q15788 (Homo sapiens) Explore Q15788  Go to UniProtKB:  Q15788 | |||||
PHAROS:  Q15788 GTEx:  ENSG00000084676  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q15788 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
5Z6 (Subject of Investigation/LOI) Query on 5Z6 | C [auth A] | 4-[(E)-3-(3,5-ditert-butylphenyl)-3-oxidanylidene-prop-1-enyl]benzoic acid C24 H28 O3 FOUVTBKPJRMLPE-FMIVXFBMSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 88.915 | α = 90 |
b = 64.979 | β = 105.23 |
c = 49.205 | γ = 90 |
Software Name | Purpose |
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PHENIX | refinement |
HKL-2000 | data reduction |
SCALEPACK | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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Other government | Singapore | OFIRG16may055 |