Download MendeleyStructural identification of riluzole-binding site on human TRPC5.
Yang, Y., Wei, M., Chen, L.(2022) Cell Discov 8: 67-67
- PubMed: 35821012
- DOI: https://doi.org/10.1038/s41421-022-00410-5
- Primary Citation of Related Structures:
7WDB
7WDB
Human TRPC5 channel in complex with riluzole
- PDB DOI: https://doi.org/10.2210/pdb7WDB/pdb
- EM Map EMD-32436: EMDB EMDataResource
- Classification: MEMBRANE PROTEIN
- Organism(s): Homo sapiens
- Expression System: Homo sapiens
- Mutation(s): No
- Membrane Protein: Yes PDBTMMemProtMDmpstruc
- Deposited: 2021-12-21 Released: 2022-04-13
- Funding Organization(s): National Natural Science Foundation of China (NSFC), National Science Foundation (NSF, China)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 2.40 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Short transient receptor potential channel 5 | A, B, C, D | 764 | Homo sapiens | Mutation(s): 0 Gene Names: TRPC5, TRP5 Membrane Entity: Yes |  |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9UL62 (Homo sapiens) Explore Q9UL62 Go to UniProtKB: Q9UL62 | |||||
PHAROS: Q9UL62 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q9UL62 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 7 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| POV Query on POV | E [auth A], L [auth B], S [auth C], Z [auth D] | (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate C42 H82 N O8 P WTJKGGKOPKCXLL-PFDVCBLKSA-N |  | Ligand Interaction | |
| PTY Query on PTY | EA [auth D], J [auth A], Q [auth B], X [auth C] | PHOSPHATIDYLETHANOLAMINE C40 H80 N O8 P NJGIRBISCGPRPF-KXQOOQHDSA-N |  | Ligand Interaction | |
| 7OC Query on 7OC | FA [auth D], K [auth A], R [auth B], Y [auth C] | [3-[(~{E})-octadec-10-enoyl]oxy-2-oxidanyl-propyl] (~{E})-octadec-10-enoate C39 H72 O5 YVMVBCNUZPOELF-YTEMWHBBSA-N |  | Ligand Interaction | |
| Y01 Query on Y01 | AA [auth D], F [auth A], M [auth B], T [auth C] | CHOLESTEROL HEMISUCCINATE C31 H50 O4 WLNARFZDISHUGS-MIXBDBMTSA-N |  | Ligand Interaction | |
| 657 (Subject of Investigation/LOI) Query on 657 | DA [auth D], I [auth A], P [auth B], W [auth C] | 6-(trifluoromethoxy)-1,3-benzothiazol-2-amine C8 H5 F3 N2 O S FTALBRSUTCGOEG-UHFFFAOYSA-N |  | Ligand Interaction | |
| ZN Query on ZN | BA [auth D], G [auth A], N [auth B], U [auth C] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| CA Query on CA | CA [auth D], H [auth A], O [auth B], V [auth C] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 2.40 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Natural Science Foundation of China (NSFC) | China | 91957201 |
| National Natural Science Foundation of China (NSFC) | China | 31870833 |
| National Science Foundation (NSF, China) | China | 31821091 |
| National Science Foundation (NSF, China) | China | 11902021 |
Revision History (Full details and data files)
- Version 1.0: 2022-04-13
Type: Initial release - Version 1.1: 2022-08-03
Changes: Database references
