7VD7

Toxin - Antitoxin complex from Salmonella enterica serovar Typhimurium


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.196 
  • R-Value Observed: 0.197 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Toxin-Antitoxin complex from Salmonella enterica serovar Typhimurium

Eun, H.-J.Jang, S.-W.Park, J.-H.Lee, B.-J.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
toxin94Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 1 
UniProt
Find proteins for Q7CP72 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore Q7CP72 
Go to UniProtKB:  Q7CP72
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ7CP72
Sequence Annotations
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
antitoxin44Salmonella enterica subsp. enterica serovar TyphimuriumMutation(s): 0 
UniProt
Find proteins for Q7CP71 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720))
Explore Q7CP71 
Go to UniProtKB:  Q7CP71
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ7CP71
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.43 Å
  • R-Value Free: 0.216 
  • R-Value Work: 0.196 
  • R-Value Observed: 0.197 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.366α = 90
b = 31.605β = 90.63
c = 47.985γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Research Foundation (NRF, Korea)Korea, Republic Of2018R1A5A2024425
National Research Foundation (NRF, Korea)Korea, Republic Of2021R1F1A1050961
National Research Foundation (NRF, Korea)Korea, Republic Of2021 BK21 Plus Project for Medicine, Dentistry and Pharmacy

Revision History  (Full details and data files)

  • Version 1.0: 2022-09-14
    Type: Initial release
  • Version 1.1: 2022-09-28
    Changes: Database references
  • Version 1.2: 2024-04-03
    Changes: Data collection, Refinement description