7RUS | pdb_00007rus

Crystal structure of the octameric form of Rv3208A

PDB DOI: https://doi.org/10.2210/pdb7RUS/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Mycobacterium tuberculosis
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2021-08-18 Released: 2022-08-24
Deposition Author(s): Mandyoli, L., Sacchettini, J.C.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.87 Å
R-Value Free:
0.225 (Depositor), 0.220 (DCC)
R-Value Work:
0.198 (Depositor), 0.200 (DCC)
R-Value Observed:
0.199 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Crystal structure of the octameric form of Rv3208A

Mandyoli, L., Sacchettini, J.C.

To be published.

Macromolecule Content

Total Structure Weight: 75.55 kDa
Atom Count: 4,085
Modeled Residue Count: 525
Deposited Residue Count: 720
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
DUF3107 domain-containing protein	A B C D E [auth N] A, B, C, D, E [auth N], F [auth P], G [auth e], H [auth g]	90	Mycobacterium tuberculosis	Mutation(s): 0 Gene Names: C0094_17620, DSI38_17570, E5M05_15990, E5M52_14385, E5M78_14150, FRD82_06095, GCL30_06650
UniProt
Find proteins for Q6MWZ8 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)) Explore Q6MWZ8 Go to UniProtKB: Q6MWZ8
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q6MWZ8
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.87 Å
R-Value Free: 0.225 (Depositor), 0.220 (DCC)
R-Value Work: 0.198 (Depositor), 0.200 (DCC)
R-Value Observed: 0.199 (Depositor)

Space Group: P 2 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 54.411	α = 90
b = 79.456	β = 90
c = 119.063	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data reduction
PHENIX	refinement
SHELX	phasing
Coot	model building
SCALA	data scaling

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-08-24

Deposition Author(s):

Sacchettini, J.C.

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	--

Revision History (Full details and data files)

Version 1.0: 2022-08-24
Type: Initial release
Version 1.1: 2024-05-22
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.