Crystal structure of phosphoserine phosphatase (SerB) from Brucella melitensis in complex with phosphate and magnesium
Pierson, E., Wouters, J.To be published.
Experimental Data Snapshot
Starting Model: in silico
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
O-phosphoserine phosphohydrolase | 307 | Brucella melitensis bv. 1 str. 16M | Mutation(s): 0  Gene Names: BMEI0615 EC: 3.1.3.3 | ![]() | |
UniProt | |||||
Find proteins for Q8YI30 (Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)) Explore Q8YI30  Go to UniProtKB:  Q8YI30 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8YI30 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PEG Query on PEG | B [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
PO4 Query on PO4 | Q [auth A] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
GOL Query on GOL | C [auth A] E [auth A] I [auth A] J [auth A] K [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
EDO Query on EDO | L [auth A], M [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
FMT Query on FMT | D [auth A], F [auth A], G [auth A], H [auth A], O [auth A] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | P [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 143.21 | α = 90 |
b = 143.21 | β = 90 |
c = 143.21 | γ = 90 |
Software Name | Purpose |
---|---|
BUSTER | refinement |
PHENIX | refinement |
MxCuBE | data collection |
autoPROC | data processing |
PHASER | phasing |
Coot | model building |
XDS | data reduction |
XSCALE | data scaling |
Funding Organization | Location | Grant Number |
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Other government | Belgium | -- |