7NVH

Cryo-EM structure of the mycolic acid transporter MmpL3 from M. tuberculosis


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Cryo-EM structure and resistance landscape of M. tuberculosis MmpL3: An emergent therapeutic target.

Adams, O.Deme, J.C.Parker, J.L.Fowler, P.W.Lea, S.M.Newstead, S.

(2021) Structure 29: 1182-1191.e4

  • DOI: https://doi.org/10.1016/j.str.2021.06.013
  • Primary Citation of Related Structures:  
    7NVH

  • PubMed Abstract: 

    Tuberculosis (TB) is the leading cause of death from a single infectious agent and in 2019 an estimated 10 million people worldwide contracted the disease. Although treatments for TB exist, continual emergence of drug-resistant variants necessitates urgent development of novel antituberculars. An important new target is the lipid transporter MmpL3, which is required for construction of the unique cell envelope that shields Mycobacterium tuberculosis (Mtb) from the immune system. However, a structural understanding of the mutations in Mtb MmpL3 that confer resistance to the many preclinical leads is lacking, hampering efforts to circumvent resistance mechanisms. Here, we present the cryoelectron microscopy structure of Mtb MmpL3 and use it to comprehensively analyze the mutational landscape of drug resistance. Our data provide a rational explanation for resistance variants local to the central drug binding site, and also highlight a potential alternative route to resistance operating within the periplasmic domain.


  • Organizational Affiliation

    Department of Biochemistry, University of Oxford, Oxford OX1 3QU, UK.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Trehalose monomycolate exporter MmpL3761Mycobacterium tuberculosisMutation(s): 0 
Gene Names: mmpL3Rv0206cMTCY08D5.01cMTV033.14c
Membrane Entity: Yes 
UniProt
Find proteins for P9WJV5 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore P9WJV5 
Go to UniProtKB:  P9WJV5
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP9WJV5
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
AV0
Query on AV0

Download Ideal Coordinates CCD File 
B [auth A]Lauryl Maltose Neopentyl Glycol
C47 H88 O22
MADJBYLAYPCCOO-VWHTXWAPSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.00 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom201536
Wellcome TrustUnited Kingdom215519
Wellcome TrustUnited Kingdom219531
Medical Research Council (MRC, United Kingdom)United KingdomMR/S021043/1
Medical Research Council (MRC, United Kingdom)United KingdomS021264
Biotechnology and Biological Sciences Research Council (BBSRC)United KingdomBB/M011224/1

Revision History  (Full details and data files)

  • Version 1.0: 2021-06-16
    Type: Initial release
  • Version 1.1: 2021-07-21
    Changes: Database references
  • Version 1.2: 2021-10-20
    Changes: Data collection, Database references
  • Version 1.3: 2022-12-21
    Changes: Database references, Source and taxonomy, Structure summary