7L0J
Structure of AMH bound to AMHR2-ECD
- PDB DOI: https://doi.org/10.2210/pdb7L0J/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Homo sapiens
- Expression System: Cricetulus griseus, Spodoptera frugiperda
- Mutation(s): Yes 
- Deposited: 2020-12-11 Released: 2021-06-23 
- Funding Organization(s): National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.268 
- R-Value Work: 0.241 
- R-Value Observed: 0.243 
This is version 1.2 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Muellerian-inhibiting factor | 109 | Homo sapiens | Mutation(s): 1  Gene Names: AMH, MIF | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P03971 (Homo sapiens) Explore P03971  Go to UniProtKB:  P03971 | |||||
PHAROS:  P03971 GTEx:  ENSG00000104899  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P03971 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Anti-Muellerian hormone type-2 receptor | 111 | Homo sapiens | Mutation(s): 0  Gene Names: AMHR2, AMHR, MISR2 EC: 2.7.11.30 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q16671 (Homo sapiens) Explore Q16671  Go to UniProtKB:  Q16671 | |||||
PHAROS:  Q16671 GTEx:  ENSG00000135409  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q16671 | ||||
Sequence AnnotationsExpand | |||||
|
Small Molecules
Ligands 2 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | C [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
SO4 Query on SO4 | D [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.60 Å
- R-Value Free: 0.268 
- R-Value Work: 0.241 
- R-Value Observed: 0.243 
- Space Group: P 41 21 2
Unit Cell:
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 66.376 | α = 90 |
b = 66.376 | β = 90 |
c = 125.922 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
DIALS | data reduction |
Aimless | data scaling |
PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2021-06-23  Deposition Author(s): Hart, K.N., Thompson, T.B.
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) | United States | 5T32ES007250-30 |
Revision History (Full details and data files)
- Version 1.0: 2021-06-23
Type: Initial release - Version 1.1: 2021-07-28
Changes: Database references - Version 1.2: 2023-10-18
Changes: Data collection, Database references, Refinement description