7JI3

Cryo-EM structure of a proton-activated chloride channel


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.46 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Cryo-EM structure of a proton-activated chloride channel TMEM206.

Deng, Z.Zhao, Y.Feng, J.Zhang, J.Zhao, H.Rau, M.J.Fitzpatrick, J.A.J.Hu, H.Yuan, P.

(2021) Sci Adv 7

  • DOI: https://doi.org/10.1126/sciadv.abe5983
  • Primary Citation of Related Structures:  
    7JI3

  • PubMed Abstract: 

    TMEM206 has been recently identified as an evolutionarily conserved chloride channel that underlies ubiquitously expressed, proton-activated, outwardly rectifying anion currents. Here, we report the cryo-electron microscopy structure of pufferfish TMEM206, which forms a trimeric channel, with each subunit comprising two transmembrane segments and a large extracellular domain. An ample vestibule in the extracellular region is accessible laterally from the three side portals. The central pore contains multiple constrictions. A conserved lysine residue near the cytoplasmic end of the inner helix forms the presumed chloride ion selectivity filter. Unprecedentedly, the core structure and assembly closely resemble those of the epithelial sodium channel/degenerin family of sodium channels that are unrelated in amino acid sequence and conduct cations instead of anions. Together with electrophysiology, this work provides insights into ion conduction and gating for a new class of chloride channels that is architecturally distinct from previously characterized chloride channel families.


  • Organizational Affiliation

    Department of Cell Biology and Physiology, Washington University School of Medicine, Saint Louis, MO 63110, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Proton-activated chloride channel
A, B, C
463Takifugu bimaculatusMutation(s): 0 
Gene Names: fugu_017091
Membrane Entity: Yes 
UniProt
Find proteins for A0A4Z2BWB0 (Takifugu bimaculatus)
Explore A0A4Z2BWB0 
Go to UniProtKB:  A0A4Z2BWB0
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A4Z2BWB0
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.46 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-03-03
    Type: Initial release
  • Version 1.1: 2021-03-10
    Changes: Database references