7F73

Cryo-EM structure of human TMEM120B

PDB DOI: https://doi.org/10.2210/pdb7F73/pdb
EM Map EMD-31484: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Anaplasma marginale, Homo sapiens
Expression System: Homo sapiens
Mutation(s): No
Membrane Protein: Yes OPMPDBTM

Deposited: 2021-06-27 Released: 2021-09-01
Deposition Author(s): Ke, M., Wu, J., Yan, Z.

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Cryo-EM structures of human TMEM120A and TMEM120B.

Ke, M., Yu, Y., Zhao, C., Lai, S., Su, Q., Yuan, W., Yang, L., Deng, D., Wu, K., Zeng, W., Geng, J., Wu, J., Yan, Z.

(2021) Cell Discov 7: 77-77

PubMed: 34465718 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1038/s41421-021-00319-5
Primary Citation of Related Structures:
7CXR, 7F73

Organizational Affiliation

Key Laboratory of Structural Biology of Zhejiang Province, School of Life Sciences, Westlake University, Hangzhou, Zhejiang, China.

Macromolecule Content

Total Structure Weight: 144.57 kDa
Atom Count: 4,934
Modelled Residue Count: 586
Deposited Residue Count: 1,242
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
MCherry fluorescent protein,Transmembrane protein 120B	A, B	621	Anaplasma marginale, Homo sapiens This entity is chimeric	Mutation(s): 0 Gene Names: mCherry, TMEM120B Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for X5DSL3 (Anaplasma marginale) Explore X5DSL3 Go to UniProtKB: X5DSL3
Find proteins for A0PK00 (Homo sapiens) Explore A0PK00 Go to UniProtKB: A0PK00
PHAROS: A0PK00 GTEx: ENSG00000188735
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Groups	X5DSL3A0PK00
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 4.00 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2021-09-01

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2021-09-01
Type: Initial release
Version 1.1: 2022-03-02
Changes: Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.