7E1Y | pdb_00007e1y

Staphylothermus marinus amylopullulanase -SmApu

PDB DOI: https://doi.org/10.2210/pdb7E1Y/pdb
EM Map EMD-30946: EMDB EMDataResource

Classification: HYDROLASE
Organism(s): Staphylothermus marinus F1
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2021-02-04 Released: 2022-02-09
Deposition Author(s): Li, D., Li, X., Woo, E.-J.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Staphylothermus marinus amylopullulanase -SmApu

Li, D., Li, X.

To be published.

Macromolecule Content

Total Structure Weight: 607.87 kDa
Atom Count: 35,743
Modeled Residue Count: 4,304
Deposited Residue Count: 5,176
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Glycoside hydrolase, family 57	A, B, C, D, E A, B, C, D, E, F, G, H	647	Staphylothermus marinus F1	Mutation(s): 0 Gene Names: Smar_1407
UniProt
Find proteins for A3DPD7 (Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / JCM 9404 / F1)) Explore A3DPD7 Go to UniProtKB: A3DPD7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A3DPD7
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.90 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-02-09

Deposition Author(s):

Funding Organization	Location	Grant Number
National Natural Science Foundation of China (NSFC)	China	31671801

Revision History (Full details and data files)

Version 1.0: 2022-02-09
Type: Initial release
Version 1.1: 2024-06-05
Changes: Data collection

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.