7DXJ | pdb_00007dxj

Human 46QHuntingtin-HAP40 complex structure


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history

Literature

Pathological polyQ expansion does not alter the conformation of the Huntingtin-HAP40 complex.

Huang, B.Guo, Q.Niedermeier, M.L.Cheng, J.Engler, T.Maurer, M.Pautsch, A.Baumeister, W.Stengel, F.Kochanek, S.Fernandez-Busnadiego, R.

(2021) Structure 29: 804-809.e5

  • DOI: https://doi.org/10.1016/j.str.2021.04.003
  • Primary Citation Related Structures: 
    7DXJ, 7DXK

  • PubMed Abstract: 

    The abnormal amplification of a CAG repeat in the gene coding for huntingtin (HTT) leads to Huntington's disease (HD). At the protein level, this translates into the expansion of a polyglutamine (polyQ) stretch located at the HTT N terminus, which renders HTT aggregation prone by unknown mechanisms. Here we investigated the effects of polyQ expansion on HTT in a complex with its stabilizing interaction partner huntingtin-associated protein 40 (HAP40). Surprisingly, our comprehensive biophysical, crosslinking mass spectrometry and cryo-EM experiments revealed no major differences in the conformation of HTT-HAP40 complexes of various polyQ length, including 17QHTT-HAP40 (wild type), 46QHTT-HAP40 (typical polyQ length in HD patients), and 128QHTT-HAP40 (extreme polyQ length). Thus, HTT polyQ expansion does not alter the global conformation of HTT when associated with HAP40.


  • Organizational Affiliation
    • Department of Gene Therapy, Ulm University, 89081, Ulm, Germany.

Macromolecule Content 

  • Total Structure Weight: 390.33 kDa 
  • Atom Count: 20,491 
  • Modeled Residue Count: 2,621 
  • Deposited Residue Count: 3,538 
  • Unique protein chains: 2

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
Huntingtin3,167Homo sapienssynthetic constructMutation(s): 2 
Gene Names: HTTHDIT15
UniProt & NIH Common Fund Data Resources
Find proteins for P42858 (Homo sapiens)
Explore P42858 
Go to UniProtKB:  P42858
PHAROS:  P42858
GTEx:  ENSG00000197386 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP42858
Sequence Annotations
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Reference Sequence
Find similar proteins by:|  3D Structure
Entity ID: 2
MoleculeChains  Sequence LengthOrganismDetailsImage
40-kDa huntingtin-associated protein371Homo sapiensMutation(s): 0 
Gene Names: F8A1F8A2F8A3
UniProt & NIH Common Fund Data Resources
Find proteins for P23610 (Homo sapiens)
Explore P23610 
Go to UniProtKB:  P23610
GTEx:  ENSG00000277150 
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP23610
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.60 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
German Research Foundation (DFG)Germany412854449
European CommissionEuropean UnionERC-2012-SyG 318987-ToPAG
German Research Foundation (DFG)GermanyEXC 2067/1- 390729940
German Research Foundation (DFG)GermanySTE 2517/1-1

Revision History  (Full details and data files)

  • Version 1.0: 2021-03-24
    Type: Initial release
  • Version 1.1: 2021-10-06
    Changes: Database references
  • Version 1.2: 2024-11-13
    Changes: Data collection, Structure summary