7CMZ

Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.215 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.180 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal Structure of BRCT7/8 in Complex with the APS Motif of PHF8

Che, S.Y.Ma, S.Cao, C.Yao, Z.Shi, L.Yang, N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
DNA topoisomerase 2-binding protein 1A230Homo sapiensMutation(s): 0 
Gene Names: TOPBP1KIAA0259
Find proteins for Q92547 (Homo sapiens)
Explore Q92547 
Go to UniProtKB:  Q92547
NIH Common Fund Data Resources
PHAROS:  Q92547
Protein Feature View
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  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Histone lysine demethylase PHF8B22Homo sapiensMutation(s): 0 
Gene Names: PHF8KIAA1111ZNF422
EC: 1.14.11.27 (PDB Primary Data), 1.14.11.65 (PDB Primary Data)
Find proteins for Q9UPP1 (Homo sapiens)
Explore Q9UPP1 
Go to UniProtKB:  Q9UPP1
NIH Common Fund Data Resources
PHAROS:  Q9UPP1
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download Ideal Coordinates CCD File 
C [auth A]POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
NA
Query on NA

Download Ideal Coordinates CCD File 
D [auth A]SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.70 Å
  • R-Value Free: 0.215 
  • R-Value Work: 0.178 
  • R-Value Observed: 0.180 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 54.517α = 90
b = 60.35β = 90
c = 66.03γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data scaling
PDB_EXTRACTdata extraction
HKL-2000data reduction
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China81972660
National Natural Science Foundation of China (NSFC)China31671474
Ministry of Science and Technology (MoST, China)China2018YFA0107004
Ministry of Science and Technology (MoST, China)China2019YFA0508902

Revision History  (Full details and data files)

  • Version 1.0: 2021-03-17
    Type: Initial release