7CCL | pdb_00007ccl

Crystal structure of human BFK

• PDB DOI: https://doi.org/10.2210/pdb7CCL/pdb

• Classification: APOPTOSIS
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2020-06-17 Released: 2021-06-23 
• Deposition Author(s): Jang, D.M., Oh, E.K., Han, B.W.
• Funding Organization(s): National Research Foundation (NRF, Korea)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.70 Å
• R-Value Free: 
  0.190 (Depositor), 0.200 (DCC) 
• R-Value Work: 
  0.158 (Depositor), 0.170 (DCC) 

Starting Model: experimental

Literature

Structural analyses on human BFK, a Novel BCL-2 Family Member.

Jang, D.M., Oh, E.K., Han, B.W.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Biological Assembly 3  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 3 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 59.72 kDa 
• Atom Count: 3,317 
• Modeled Residue Count: 434 
• Deposited Residue Count: 549 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bcl-2-like protein 15	A, B, C	183	Homo sapiens	Mutation(s): 0  Gene Names: BCL2L15, C1orf178
UniProt & NIH Common Fund Data Resources
Find proteins for Q5TBC7 (Homo sapiens) Explore Q5TBC7  Go to UniProtKB:  Q5TBC7
PHAROS:  Q5TBC7 GTEx:  ENSG00000188761

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.70 Å
• R-Value Free:  0.190 (Depositor), 0.200 (DCC) 
• R-Value Work:  0.158 (Depositor), 0.170 (DCC) 

Space Group: P 3₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 116.5	α = 90
b = 116.5	β = 90
c = 27.63	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XDS	data scaling
MOLREP	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2021-06-23 
Deposition Author(s): Jang, D.M., Oh, E.K., Han, B.W.

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Funding Organization	Location	Grant Number
National Research Foundation (NRF, Korea)	Korea, Republic Of	2011-0030001

Revision History  

• Version 1.0: 2021-06-23
  Type: Initial release
  
• Version 1.1: 2021-07-07
  Changes: Data collection
• Version 1.2: 2023-11-29
  Changes: Data collection, Database references, Derived calculations, Refinement description