7CCI | pdb_00007cci

Acinetobacter baumannii response regulator AdeR with disordered N terminus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 
    0.186 (Depositor), 0.185 (DCC) 
  • R-Value Work: 
    0.154 (Depositor), 0.155 (DCC) 
  • R-Value Observed: 
    0.157 (Depositor) 

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

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This is version 1.1 of the entry. See complete history

Literature

Proteolysis and multimerization regulate signaling along the two-component regulatory system AdeRS.

Ouyang, Z.Zheng, F.Zhu, L.Felix, J.Wu, D.Wu, K.Gutsche, I.Wu, Y.Hwang, P.M.She, J.Wen, Y.

(2021) iScience 24: 102476-102476

  • DOI: https://doi.org/10.1016/j.isci.2021.102476
  • Primary Citation Related Structures: 
    7CCH, 7CCI

  • PubMed Abstract: 

    Bacterial two-component regulatory systems are ubiquitous environment-sensing signal transducers involved in pathogenesis and antibiotic resistance. The Acinetobacter baumannii two-component regulatory system AdeRS is made up of a sensor histidine kinase AdeS and a cognate response regulator AdeR, which together reduce repression of the multidrug-resistant efflux pump AdeABC. Herein we demonstrate that an N-terminal intrinsically disordered tail in AdeR is important for the upregulation of adeABC expression, although it greatly increases the susceptibility of AdeR to proteasome-mediated degradation. We also show that AdeS assembles into a hexameric state that is necessary for its full histidine kinase activity, which appears to occur via cis autophosphorylation. Taken together, this study demonstrates new structural mechanisms through which two-component systems can transduce environmental signals to impact gene expression and enlightens new potential antimicrobial approach by targeting two-component regulatory systems.


  • Organizational Affiliation
    • Talent Highland and Center for Gut Microbiome Research of Med-X Institute, The First Affiliated Hospital, Xi'an Jiaotong University, Xi'an 710061, China.

Macromolecule Content 

  • Total Structure Weight: 32.93 kDa 
  • Atom Count: 2,501 
  • Modeled Residue Count: 267 
  • Deposited Residue Count: 288 
  • Unique protein chains: 1

Macromolecules

Find similar proteins by:|  3D Structure
Entity ID: 1
MoleculeChains  Sequence LengthOrganismDetailsImage
AdeR
A, B
144Acinetobacter baumanniiMutation(s): 0 
Gene Names: adeRFJV14_17460
UniProt
Find proteins for Q6TA00 (Acinetobacter baumannii)
Explore Q6TA00 
Go to UniProtKB:  Q6TA00
Entity Groups
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6TA00
Sequence Annotations
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Reference Sequence

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free:  0.186 (Depositor), 0.185 (DCC) 
  • R-Value Work:  0.154 (Depositor), 0.155 (DCC) 
  • R-Value Observed: 0.157 (Depositor) 
Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 34.885α = 90
b = 70.975β = 107.065
c = 53.25γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
MOLREPphasing

Structure Validation

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Entry History 

& Funding Information

Deposition Data

  • Released Date: 2021-06-23 
  • Deposition Author(s): Wen, Y.

Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China31870132

Revision History  (Full details and data files)

  • Version 1.0: 2021-06-23
    Type: Initial release
  • Version 1.1: 2023-11-29
    Changes: Data collection, Database references, Refinement description