Download MendeleyStructure of Cystathionine gamma-lyase from Pseudomonas aeruginosa
Fernandez-Rodriguez, C., Oyenarte, I., Gonzalez-Recio, I., Majtan, T., Astegno, A., Martinez-Cruz, L.A.To be published.
7BA4 | pdb_00007ba4
7BA4 | pdb_00007ba4
Structure of Cystathionine gamma-lyase from Pseudomonas aeruginosa
- PDB DOI: https://doi.org/10.2210/pdb7BA4/pdb
- Classification: CYTOSOLIC PROTEIN
- Organism(s): Pseudomonas aeruginosa
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2020-12-15 Released: 2021-09-29
- Funding Organization(s): Ministry of Economy and Competitiveness (MINECO)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.205 (Depositor), 0.211 (DCC)
- R-Value Work: 0.160 (Depositor), 0.167 (DCC)
- R-Value Observed: 0.162 (Depositor)
Starting Model: experimental
View more details
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
| 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Cystathionine gamma-lyase | 400 | Pseudomonas aeruginosa | Mutation(s): 0 Gene Names: CGU42_31115, ECC04_012645, FC629_02215, GNQ48_07915, IPC582_10875 EC: 2.5.1.48 |  | |
UniProt | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | A0A509J8D5 | ||||
Sequence AnnotationsExpand | |||||
Reference Sequence | |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PLP (Subject of Investigation/LOI) Download:Ideal Coordinates CCD File | E [auth A], F [auth B], G [auth C], H [auth D] | PYRIDOXAL-5'-PHOSPHATE C8 H10 N O6 P NGVDGCNFYWLIFO-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.205 (Depositor), 0.211 (DCC)
- R-Value Work: 0.160 (Depositor), 0.167 (DCC)
- R-Value Observed: 0.162 (Depositor)
Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 79.304 | α = 90 |
| b = 79.304 | β = 90 |
| c = 446.668 | γ = 120 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PHENIX | refinement |
| PDB_EXTRACT | data extraction |
Entry History
& Funding InformationDeposition Data
- Released Date: 2021-09-29 Deposition Author(s): Fernandez-Rodriguez, C., Oyenarte, I., Gonzalez-Recio, I., Majtan, T., Astegno, A., Martinez-Cruz, L.A.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Economy and Competitiveness (MINECO) | Spain | BFU2010-17857 |
| Ministry of Economy and Competitiveness (MINECO) | Spain | PID2019-109055RB-I00 |
| Ministry of Economy and Competitiveness (MINECO) | Spain | BFU2013-47531-R |
| Ministry of Economy and Competitiveness (MINECO) | Spain | BFU2016-77408-R |
Revision History (Full details and data files)
- Version 1.0: 2021-09-29
Type: Initial release - Version 1.1: 2022-02-23
Changes: Database references, Structure summary - Version 1.2: 2024-01-31
Changes: Data collection, Refinement description
