7AS5 | pdb_00007as5

126 helix bundle DNA nanostructure

PDB DOI: https://doi.org/10.2210/pdb7AS5/pdb
EM Map EMD-11170: EMDB EMDataResource
NAKB: 7AS5

Classification: DNA
Organism(s): synthetic construct
Mutation(s): No

Deposited: 2020-10-27 Released: 2020-11-18
Deposition Author(s): Kube, M., Kohler, F., Feigl, E., Nagel-Yuksel, B., Willner, E.M., Funke, J.J., Gerling, T., Stommer, P., Honemann, M.N., Martin, T.G., Scheres, S.H.W., Dietz, H.
Funding Organization(s): German Research Foundation (DFG), European Research Council (ERC)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 9.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

Currently 7AS5 does not have a validation slider image.

This is version 1.3 of the entry. See complete history.

Literature

Revealing the structures of megadalton-scale DNA complexes with nucleotide resolution.

Kube, M., Kohler, F., Feigl, E., Nagel-Yuksel, B., Willner, E.M., Funke, J.J., Gerling, T., Stommer, P., Honemann, M.N., Martin, T.G., Scheres, S.H.W., Dietz, H.

(2020) Nat Commun 11: 6229-6229

PubMed: 33277481 Search on PubMedSearch on PubMed Central
DOI: https://doi.org/10.1038/s41467-020-20020-7
Primary Citation of Related Structures:
7ARE, 7ARQ, 7ART, 7ARV, 7ARY, 7AS5

PubMed Abstract:
The methods of DNA nanotechnology enable the rational design of custom shapes that self-assemble in solution from sets of DNA molecules. DNA origami, in which a long template DNA single strand is folded by many short DNA oligonucleotides, can be employed to make objects comprising hundreds of unique DNA strands and thousands of base pairs, thus in principle providing many degrees of freedom for modelling complex objects of defined 3D shapes and sizes. Here, we address the problem of accurate structural validation of DNA objects in solution with cryo-EM based methodologies. By taking into account structural fluctuations, we can determine structures with improved detail compared to previous work. To interpret the experimental cryo-EM maps, we present molecular-dynamics-based methods for building pseudo-atomic models in a semi-automated fashion. Among other features, our data allows discerning details such as helical grooves, single-strand versus double-strand crossovers, backbone phosphate positions, and single-strand breaks. Obtaining this higher level of detail is a step forward that now allows designers to inspect and refine their designs with base-pair level interventions.

Organizational Affiliation

Physik Department, Technische Universität München, Garching, Germany.

Macromolecule Content

Total Structure Weight: 9,996.31 kDa
Atom Count: 662,907
Modeled Residue Count: 32,459
Deposited Residue Count: 32,459
Unique nucleic acid chains: 455

Macromolecules

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Entity ID: 1
Molecule	Chains	Length	Organism	Image
SCAFFOLD STRAND	A [auth AA]	7,560	synthetic construct
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Entity ID: 2
Molecule	Chains	Length	Organism	Image
SCAFFOLD STRAND	B [auth AB]	7,561	synthetic construct
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Entity ID: 3
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	C [auth AC]	50	synthetic construct
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Entity ID: 4
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STAPLE STRAND	D [auth AD]	50	synthetic construct
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Entity ID: 5
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STAPLE STRAND	E [auth AE]	50	synthetic construct
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Entity ID: 6
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STAPLE STRAND	F [auth AF]	50	synthetic construct
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Entity ID: 7
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STAPLE STRAND	G [auth AG]	50	synthetic construct
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Entity ID: 8
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STAPLE STRAND	H [auth AH]	50	synthetic construct
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Entity ID: 9
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STAPLE STRAND	I [auth AI]	50	synthetic construct
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STAPLE STRAND	J [auth AJ]	50	synthetic construct
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Entity ID: 11
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STAPLE STRAND	K [auth AK]	50	synthetic construct
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STAPLE STRAND	L [auth AL]	50	synthetic construct
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STAPLE STRAND	M [auth AM]	50	synthetic construct
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STAPLE STRAND	N [auth AN]	50	synthetic construct
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STAPLE STRAND	O [auth AO]	50	synthetic construct
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STAPLE STRAND	P [auth AP]	50	synthetic construct
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STAPLE STRAND	Q [auth AQ]	50	synthetic construct
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STAPLE STRAND	R [auth AR]	50	synthetic construct
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STAPLE STRAND	S [auth AS]	50	synthetic construct
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STAPLE STRAND	T [auth AT]	50	synthetic construct
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STAPLE STRAND	U [auth AU]	50	synthetic construct
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STAPLE STRAND	V [auth AV]	50	synthetic construct
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Entity ID: 58
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STAPLE STRAND	FB [auth A5]	50	synthetic construct
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Entity ID: 113
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ID [auth By]	42	synthetic construct
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Entity ID: 114
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JD [auth Bz]	42	synthetic construct
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Entity ID: 115
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KD [auth B0]	42	synthetic construct
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Entity ID: 116
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LD [auth B1]	42	synthetic construct
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Entity ID: 117
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MD [auth B2]	42	synthetic construct
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Entity ID: 118
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ND [auth B3]	42	synthetic construct
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Entity ID: 119
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OD [auth B4]	42	synthetic construct
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Entity ID: 120
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PD [auth B5]	42	synthetic construct
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Entity ID: 121
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QD [auth B6]	42	synthetic construct
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Entity ID: 122
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RD [auth B7]	42	synthetic construct
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Entity ID: 123
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SD [auth B8]	42	synthetic construct
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Entity ID: 124
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TD [auth B9]	42	synthetic construct
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Entity ID: 125
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UD [auth CA]	42	synthetic construct
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Entity ID: 126
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VD [auth CB]	42	synthetic construct
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Entity ID: 127
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WD [auth CC]	42	synthetic construct
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Entity ID: 128
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XD [auth CD]	42	synthetic construct
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Entity ID: 129
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YD [auth CE]	42	synthetic construct
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Entity ID: 130
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZD [auth CF]	42	synthetic construct
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Entity ID: 131
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AE [auth CG]	42	synthetic construct
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Entity ID: 132
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BE [auth CH]	42	synthetic construct
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Entity ID: 133
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CE [auth CI]	42	synthetic construct
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Entity ID: 134
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DE [auth CJ]	42	synthetic construct
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Entity ID: 135
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EE [auth CK]	42	synthetic construct
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Entity ID: 136
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FE [auth CL]	42	synthetic construct
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Entity ID: 137
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GE [auth CM]	42	synthetic construct
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Entity ID: 138
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HE [auth CN]	42	synthetic construct
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Entity ID: 139
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IE [auth CO]	42	synthetic construct
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Entity ID: 140
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JE [auth CP]	42	synthetic construct
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Entity ID: 141
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KE [auth CQ]	42	synthetic construct
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Entity ID: 142
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LE [auth CR]	42	synthetic construct
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Entity ID: 143
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ME [auth CS]	42	synthetic construct
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Entity ID: 144
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NE [auth CT]	42	synthetic construct
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Entity ID: 145
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OE [auth CU]	42	synthetic construct
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Entity ID: 146
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PE [auth CV]	42	synthetic construct
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Entity ID: 147
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QE [auth CW]	42	synthetic construct
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Entity ID: 148
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RE [auth CX]	42	synthetic construct
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Entity ID: 149
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SE [auth CY]	42	synthetic construct
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Entity ID: 150
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TE [auth CZ]	42	synthetic construct
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Entity ID: 151
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UE [auth Ca]	42	synthetic construct
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Entity ID: 152
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VE [auth Cb]	42	synthetic construct
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Entity ID: 153
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WE [auth Cc]	42	synthetic construct
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Entity ID: 154
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XE [auth Cd]	42	synthetic construct
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Entity ID: 155
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YE [auth Ce]	42	synthetic construct
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Entity ID: 156
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZE [auth Cf]	42	synthetic construct
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Entity ID: 157
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AF [auth Cg]	42	synthetic construct
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Entity ID: 158
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BF [auth Ch]	42	synthetic construct
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Entity ID: 159
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CF [auth Ci]	42	synthetic construct
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Entity ID: 160
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DF [auth Cj]	42	synthetic construct
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Entity ID: 161
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EF [auth Ck]	42	synthetic construct
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Entity ID: 162
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FF [auth Cl]	42	synthetic construct
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Entity ID: 163
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GF [auth Cm]	42	synthetic construct
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Entity ID: 164
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HF [auth Cn]	42	synthetic construct
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Entity ID: 165
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IF [auth Co]	42	synthetic construct
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Entity ID: 166
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JF [auth Cp]	42	synthetic construct
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Entity ID: 167
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KF [auth Cq]	42	synthetic construct
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Entity ID: 168
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LF [auth Cr]	42	synthetic construct
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Entity ID: 169
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MF [auth Cs]	42	synthetic construct
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Entity ID: 170
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NF [auth Ct]	42	synthetic construct
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Entity ID: 171
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OF [auth Cu]	42	synthetic construct
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Entity ID: 172
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PF [auth Cv]	42	synthetic construct
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Entity ID: 173
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QF [auth Cw]	42	synthetic construct
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Entity ID: 174
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RF [auth Cx]	42	synthetic construct
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Entity ID: 175
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SF [auth Cy]	42	synthetic construct
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Entity ID: 176
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TF [auth Cz]	42	synthetic construct
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Entity ID: 177
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UF [auth C0]	42	synthetic construct
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Entity ID: 178
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VF [auth C1]	42	synthetic construct
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Entity ID: 179
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WF [auth C2]	42	synthetic construct
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Entity ID: 180
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XF [auth C3]	42	synthetic construct
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Entity ID: 181
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YF [auth C4]	42	synthetic construct
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Entity ID: 182
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZF [auth C5]	42	synthetic construct
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Entity ID: 183
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AG [auth C6]	42	synthetic construct
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Entity ID: 184
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BG [auth C7]	42	synthetic construct
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Entity ID: 185
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CG [auth C8]	42	synthetic construct
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Entity ID: 186
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DG [auth C9]	42	synthetic construct
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Entity ID: 187
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EG [auth DA]	42	synthetic construct
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Entity ID: 188
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FG [auth DB]	42	synthetic construct
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Entity ID: 189
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GG [auth DC]	42	synthetic construct
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Entity ID: 190
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HG [auth DD]	42	synthetic construct
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Entity ID: 191
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IG [auth DE]	42	synthetic construct
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Entity ID: 192
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JG [auth DF]	42	synthetic construct
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Entity ID: 193
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KG [auth DG]	42	synthetic construct
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Entity ID: 194
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LG [auth DH]	42	synthetic construct
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Entity ID: 195
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MG [auth DI]	42	synthetic construct
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Entity ID: 196
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NG [auth DJ]	42	synthetic construct
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Entity ID: 197
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OG [auth DK]	42	synthetic construct
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Entity ID: 198
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PG [auth DL]	42	synthetic construct
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Entity ID: 199
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QG [auth DM]	42	synthetic construct
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Entity ID: 200
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RG [auth DN]	42	synthetic construct
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Entity ID: 201
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SG [auth DO]	42	synthetic construct
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Entity ID: 202
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TG [auth DP]	42	synthetic construct
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Entity ID: 203
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UG [auth DQ]	42	synthetic construct
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Entity ID: 204
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VG [auth DR]	42	synthetic construct
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Entity ID: 205
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WG [auth DS]	42	synthetic construct
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Entity ID: 206
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XG [auth DT]	42	synthetic construct
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Entity ID: 207
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YG [auth DU]	42	synthetic construct
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Entity ID: 208
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZG [auth DV]	42	synthetic construct
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Entity ID: 209
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AH [auth DW]	42	synthetic construct
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Entity ID: 210
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BH [auth DX]	42	synthetic construct
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Entity ID: 211
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CH [auth DY]	42	synthetic construct
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Entity ID: 212
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DH [auth DZ]	42	synthetic construct
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Entity ID: 213
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EH [auth Da]	42	synthetic construct
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Entity ID: 214
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FH [auth Db]	42	synthetic construct
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Entity ID: 215
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GH [auth Dc]	42	synthetic construct
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Entity ID: 216
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HH [auth Dd]	42	synthetic construct
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Entity ID: 217
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IH [auth De]	42	synthetic construct
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Entity ID: 218
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JH [auth Df]	42	synthetic construct
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Entity ID: 219
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KH [auth Dg]	42	synthetic construct
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Entity ID: 220
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LH [auth Dh]	42	synthetic construct
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Entity ID: 221
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MH [auth Di]	42	synthetic construct
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Entity ID: 222
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NH [auth Dj]	42	synthetic construct
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Entity ID: 223
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OH [auth Dk]	42	synthetic construct
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Entity ID: 224
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PH [auth Dl]	42	synthetic construct
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Entity ID: 225
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QH [auth Dm]	42	synthetic construct
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Entity ID: 226
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RH [auth Dn]	42	synthetic construct
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Entity ID: 227
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SH [auth Do]	42	synthetic construct
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Entity ID: 228
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TH [auth Dp]	42	synthetic construct
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Entity ID: 229
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UH [auth Dq]	42	synthetic construct
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Entity ID: 230
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VH [auth Dr]	42	synthetic construct
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Entity ID: 231
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WH [auth Ds]	42	synthetic construct
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Entity ID: 232
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XH [auth Dt]	42	synthetic construct
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Entity ID: 233
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YH [auth Du]	42	synthetic construct
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Entity ID: 234
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZH [auth Dv]	42	synthetic construct
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Entity ID: 235
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AI [auth Dw]	42	synthetic construct
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Entity ID: 236
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BI [auth Dx]	42	synthetic construct
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Entity ID: 237
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CI [auth Dy]	42	synthetic construct
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Entity ID: 238
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DI [auth Dz]	42	synthetic construct
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Entity ID: 239
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EI [auth D0]	42	synthetic construct
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Entity ID: 240
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FI [auth D1]	42	synthetic construct
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Entity ID: 241
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GI [auth D2]	42	synthetic construct
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Entity ID: 242
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HI [auth D3]	42	synthetic construct
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Entity ID: 243
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	II [auth D4]	42	synthetic construct
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Entity ID: 244
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JI [auth D5]	42	synthetic construct
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Entity ID: 245
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KI [auth D6]	39	synthetic construct
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Entity ID: 246
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LI [auth D7]	39	synthetic construct
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Entity ID: 247
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MI [auth D8]	39	synthetic construct
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Entity ID: 248
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NI [auth D9]	36	synthetic construct
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Entity ID: 249
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OI [auth EA]	36	synthetic construct
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Entity ID: 250
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PI [auth EB]	35	synthetic construct
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Entity ID: 251
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QI [auth EC]	35	synthetic construct
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Entity ID: 252
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RI [auth ED]	35	synthetic construct
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Entity ID: 253
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SI [auth EE]	35	synthetic construct
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Entity ID: 254
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TI [auth EF]	35	synthetic construct
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Entity ID: 255
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UI [auth EG]	35	synthetic construct
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Entity ID: 256
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VI [auth EH]	35	synthetic construct
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Entity ID: 257
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WI [auth EI]	35	synthetic construct
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Entity ID: 258
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XI [auth EJ]	35	synthetic construct
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Entity ID: 259
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YI [auth EK]	35	synthetic construct
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Entity ID: 260
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZI [auth EL]	35	synthetic construct
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Entity ID: 261
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AJ [auth EM]	35	synthetic construct
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Entity ID: 262
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BJ [auth EN]	35	synthetic construct
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Entity ID: 263
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CJ [auth EO]	35	synthetic construct
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Entity ID: 264
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DJ [auth EP]	35	synthetic construct
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Entity ID: 265
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EJ [auth EQ]	35	synthetic construct
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Entity ID: 266
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FJ [auth ER]	35	synthetic construct
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Entity ID: 267
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GJ [auth ES]	35	synthetic construct
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Entity ID: 268
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HJ [auth ET]	35	synthetic construct
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Entity ID: 269
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IJ [auth EU]	35	synthetic construct
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Entity ID: 270
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JJ [auth EV]	35	synthetic construct
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Entity ID: 271
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KJ [auth EW]	35	synthetic construct
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Entity ID: 272
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LJ [auth EX]	35	synthetic construct
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Entity ID: 273
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MJ [auth EY]	35	synthetic construct
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Entity ID: 274
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NJ [auth EZ]	35	synthetic construct
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Entity ID: 275
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OJ [auth Ea]	35	synthetic construct
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Entity ID: 276
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PJ [auth Eb]	35	synthetic construct
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Entity ID: 277
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QJ [auth Ec]	35	synthetic construct
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Entity ID: 278
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RJ [auth Ed]	35	synthetic construct
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Entity ID: 279
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SJ [auth Ee]	35	synthetic construct
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Entity ID: 280
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TJ [auth Ef]	35	synthetic construct
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Entity ID: 281
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UJ [auth Eg]	35	synthetic construct
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Entity ID: 282
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VJ [auth Eh]	35	synthetic construct
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Entity ID: 283
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WJ [auth Ei]	35	synthetic construct
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Entity ID: 284
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XJ [auth Ej]	35	synthetic construct
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Entity ID: 285
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YJ [auth Ek]	35	synthetic construct
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Entity ID: 286
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZJ [auth El]	35	synthetic construct
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Entity ID: 287
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AK [auth Em]	35	synthetic construct
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Entity ID: 288
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BK [auth En]	35	synthetic construct
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Entity ID: 289
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CK [auth Eo]	35	synthetic construct
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Entity ID: 290
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DK [auth Ep]	35	synthetic construct
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Entity ID: 291
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EK [auth Eq]	35	synthetic construct
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Entity ID: 292
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FK [auth Er]	35	synthetic construct
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Entity ID: 293
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GK [auth Es]	35	synthetic construct
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Entity ID: 294
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HK [auth Et]	35	synthetic construct
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Entity ID: 295
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IK [auth Eu]	35	synthetic construct
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Entity ID: 296
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JK [auth Ev]	35	synthetic construct
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Entity ID: 297
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KK [auth Ew]	35	synthetic construct
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Entity ID: 298
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LK [auth Ex]	35	synthetic construct
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Entity ID: 299
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MK [auth Ey]	35	synthetic construct
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Entity ID: 300
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NK [auth Ez]	35	synthetic construct
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Entity ID: 301
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OK [auth E0]	35	synthetic construct
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Entity ID: 302
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PK [auth E1]	35	synthetic construct
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Entity ID: 303
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QK [auth E2]	35	synthetic construct
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Entity ID: 304
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RK [auth E3]	35	synthetic construct
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Entity ID: 305
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SK [auth E4]	35	synthetic construct
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Entity ID: 306
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TK [auth E5]	35	synthetic construct
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Entity ID: 307
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UK [auth E6]	35	synthetic construct
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Entity ID: 308
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VK [auth E7]	35	synthetic construct
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Entity ID: 309
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WK [auth E8]	35	synthetic construct
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Entity ID: 310
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XK [auth E9]	35	synthetic construct
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Entity ID: 311
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YK [auth FA]	35	synthetic construct
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Entity ID: 312
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZK [auth FB]	35	synthetic construct
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Entity ID: 313
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AL [auth FC]	35	synthetic construct
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Entity ID: 314
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BL [auth FD]	35	synthetic construct
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Entity ID: 315
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CL [auth FE]	35	synthetic construct
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Entity ID: 316
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DL [auth FF]	35	synthetic construct
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Entity ID: 317
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EL [auth FG]	35	synthetic construct
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Entity ID: 318
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FL [auth FH]	35	synthetic construct
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Entity ID: 319
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GL [auth FI]	35	synthetic construct
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Entity ID: 320
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HL [auth FJ]	35	synthetic construct
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Entity ID: 321
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IL [auth FK]	35	synthetic construct
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Entity ID: 322
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JL [auth FL]	35	synthetic construct
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Entity ID: 323
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KL [auth FM]	35	synthetic construct
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Entity ID: 324
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LL [auth FN]	35	synthetic construct
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Entity ID: 325
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ML [auth FO]	35	synthetic construct
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Entity ID: 326
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NL [auth FP]	35	synthetic construct
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Entity ID: 327
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OL [auth FQ]	35	synthetic construct
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Entity ID: 328
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PL [auth FR]	35	synthetic construct
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Entity ID: 329
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QL [auth FS]	35	synthetic construct
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Entity ID: 330
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RL [auth FT]	35	synthetic construct
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Entity ID: 331
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SL [auth FU]	35	synthetic construct
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Entity ID: 332
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TL [auth FV]	35	synthetic construct
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Entity ID: 333
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UL [auth FW]	35	synthetic construct
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Entity ID: 334
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VL [auth FX]	35	synthetic construct
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Entity ID: 335
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WL [auth FY]	35	synthetic construct
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Entity ID: 336
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	XL [auth FZ]	35	synthetic construct
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Entity ID: 337
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	YL [auth Fa]	35	synthetic construct
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Entity ID: 338
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	ZL [auth Fb]	35	synthetic construct
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Entity ID: 339
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	AM [auth Fc]	35	synthetic construct
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Entity ID: 340
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	BM [auth Fd]	33	synthetic construct
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Entity ID: 341
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	CM [auth Fe]	32	synthetic construct
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Entity ID: 342
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	DM [auth Ff]	32	synthetic construct
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Entity ID: 343
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	EM [auth Fg]	28	synthetic construct
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Entity ID: 344
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	FM [auth Fh]	28	synthetic construct
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Entity ID: 345
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	GM [auth Fi]	28	synthetic construct
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Entity ID: 346
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	HM [auth Fj]	28	synthetic construct
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Entity ID: 347
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	IM [auth Fk]	28	synthetic construct
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Entity ID: 348
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	JM [auth Fl]	28	synthetic construct
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Entity ID: 349
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	KM [auth Fm]	28	synthetic construct
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Entity ID: 350
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	LM [auth Fn]	28	synthetic construct
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Entity ID: 351
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	MM [auth Fo]	28	synthetic construct
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Entity ID: 352
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	NM [auth Fp]	28	synthetic construct
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Entity ID: 353
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	OM [auth Fq]	28	synthetic construct
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Entity ID: 354
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	PM [auth Fr]	28	synthetic construct
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Entity ID: 355
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	QM [auth Fs]	28	synthetic construct
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Entity ID: 356
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	RM [auth Ft]	28	synthetic construct
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Entity ID: 357
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	SM [auth Fu]	28	synthetic construct
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Entity ID: 358
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	TM [auth Fv]	28	synthetic construct
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Entity ID: 359
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	UM [auth Fw]	28	synthetic construct
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Entity ID: 360
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	VM [auth Fx]	28	synthetic construct
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Entity ID: 361
Molecule	Chains	Length	Organism	Image
STAPLE STRAND	WM [auth Fy]	28	synthetic construct
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Entity ID: 362
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STAPLE STRAND	XM [auth Fz]	28	synthetic construct
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STAPLE STRAND	YM [auth F0]	28	synthetic construct
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STAPLE STRAND	ZM [auth F1]	28	synthetic construct
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STAPLE STRAND	AN [auth F2]	28	synthetic construct
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STAPLE STRAND	CN [auth F4]	28	synthetic construct
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STAPLE STRAND	DN [auth F5]	28	synthetic construct
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STAPLE STRAND	EN [auth F6]	28	synthetic construct
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STAPLE STRAND	FN [auth F7]	28	synthetic construct
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Entity ID: 455
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STAPLE STRAND	MQ [auth HU]	19	synthetic construct
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Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 9.80 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
RECONSTRUCTION	RELION	3

Structure Validation

View Full Validation Report

Currently 7AS5 does not have a validation slider image.

Entry History & Funding Information

Deposition Data

Released Date: 2020-11-18

Deposition Author(s):

Nagel-Yuksel, B.

Scheres, S.H.W.

Funding Organization	Location	Grant Number
German Research Foundation (DFG)	Germany	--
European Research Council (ERC)	European Union	--

Revision History (Full details and data files)

Version 1.0: 2020-11-18
Type: Initial release
Version 1.1: 2020-12-23
Changes: Structure summary
Version 1.2: 2020-12-30
Changes: Database references
Version 1.3: 2024-05-15
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.