7AQV | pdb_00007aqv

Flavin-dependent tryptophan halogenase Thal: N-terminally His-tagged form of quintuple mutant (NHis-Thal-RebH5)

PDB DOI: https://doi.org/10.2210/pdb7AQV/pdb

Classification: FLAVOPROTEIN
Organism(s): Streptomyces albogriseolus
Expression System: Escherichia coli BL21(DE3)
Mutation(s): Yes

Deposited: 2020-10-23 Released: 2020-12-23
Deposition Author(s): Moritzer, A.C., Prior, T., Niemann, H.H.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.84 Å
R-Value Free:
0.199 (Depositor), 0.200 (DCC)
R-Value Work:
0.166 (Depositor), 0.170 (DCC)
R-Value Observed:
0.168 (Depositor)

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Not Cleaving the His-tag of Thal Results in More Tightly Packed and Better-Diffracting Crystals

Moritzer, A.C., Prior, T., Niemann, H.H.

(2020) Crystals (Basel)

DOI: https://doi.org/10.3390/cryst10121135

Macromolecule Content

Total Structure Weight: 124.91 kDa
Atom Count: 9,316
Modeled Residue Count: 1,050
Deposited Residue Count: 1,102
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Tryptophan 6-halogenase	A, B	551	Streptomyces albogriseolus	Mutation(s): 5 Gene Names: thal, thdH EC: 1.14.19.59
UniProt
Find proteins for A1E280 (Streptomyces albogriseolus) Explore A1E280 Go to UniProtKB: A1E280
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A1E280
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain D [auth B] MOL2 format, chain C [auth A] MOL2 format, chain D [auth B] mmCIF format, chain C [auth A] mmCIF format, chain D [auth B]	C [auth A], D [auth B]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain C [auth A] Focus chain D [auth B] Interactions & Density Focus chain C [auth A] Focus chain D [auth B]

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.84 Å
R-Value Free: 0.199 (Depositor), 0.200 (DCC)
R-Value Work: 0.166 (Depositor), 0.170 (DCC)
R-Value Observed: 0.168 (Depositor)

Diffraction Data: https://doi.org/10.15785/SBGRID/1023

Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 56	α = 90
b = 119.11	β = 104.825
c = 87.33	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2020-12-23

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2020-12-23
Type: Initial release
Version 1.1: 2024-01-31
Changes: Data collection, Database references, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.