6YUF

Cohesin complex with loader gripping DNA


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.94 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

A Structure-Based Mechanism for DNA Entry into the Cohesin Ring.

Higashi, T.L.Eickhoff, P.Sousa, J.S.Locke, J.Nans, A.Flynn, H.R.Snijders, A.P.Papageorgiou, G.O'Reilly, N.Chen, Z.A.O'Reilly, F.J.Rappsilber, J.Costa, A.Uhlmann, F.

(2020) Mol Cell 79: 917

  • DOI: https://doi.org/10.1016/j.molcel.2020.07.013
  • Primary Citation of Related Structures:  
    6YUF

  • PubMed Abstract: 

    Despite key roles in sister chromatid cohesion and chromosome organization, the mechanism by which cohesin rings are loaded onto DNA is still unknown. Here we combine biochemical approaches and cryoelectron microscopy (cryo-EM) to visualize a cohesin loading intermediate in which DNA is locked between two gates that lead into the cohesin ring. Building on this structural framework, we design experiments to establish the order of events during cohesin loading. In an initial step, DNA traverses an N-terminal kleisin gate that is first opened upon ATP binding and then closed as the cohesin loader locks the DNA against the ATPase gate. ATP hydrolysis will lead to ATPase gate opening to complete DNA entry. Whether DNA loading is successful or results in loop extrusion might be dictated by a conserved kleisin N-terminal tail that guides the DNA through the kleisin gate. Our results establish the molecular basis for cohesin loading onto DNA.


  • Organizational Affiliation

    Chromosome Segregation Laboratory, The Francis Crick Institute, London NW1 1AT, UK.


Macromolecules

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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Cohesin subunit rad21A [auth B]628Schizosaccharomyces pombe 972h-Mutation(s): 0 
Gene Names: rad21SPCC338.17c
UniProt
Find proteins for P30776 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
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Go to UniProtKB:  P30776
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UniProt GroupP30776
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  • Reference Sequence
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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Sister chromatid cohesion protein mis4B [auth D]1,587Schizosaccharomyces pombe 972h-Mutation(s): 0 
Gene Names: mis4SPAC31A2.05c
UniProt
Find proteins for Q09725 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
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Go to UniProtKB:  Q09725
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UniProt GroupQ09725
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
Structural maintenance of chromosomes protein 1C [auth A]1,228Schizosaccharomyces pombe 972h-Mutation(s): 0 
Gene Names: psm1smc1SPBC29A10.04
UniProt
Find proteins for O94383 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
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UniProt GroupO94383
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
Structural maintenance of chromosomes protein 3D [auth C]1,194Schizosaccharomyces pombe 972h-Mutation(s): 0 
Gene Names: psm3smc3SPAC10F6.09c
UniProt
Find proteins for O42649 (Schizosaccharomyces pombe (strain 972 / ATCC 24843))
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Go to UniProtKB:  O42649
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UniProt GroupO42649
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Entity ID: 5
MoleculeChains LengthOrganismImage
DNA (32-MER)E [auth X]32synthetic construct
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Entity ID: 6
MoleculeChains LengthOrganismImage
DNA (32-MER)F [auth Y]32synthetic construct
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.94 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONcryoSPARC

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research Council (ERC)--
The Francis Crick Institute--

Revision History  (Full details and data files)

  • Version 1.0: 2020-08-19
    Type: Initial release
  • Version 1.1: 2020-09-30
    Changes: Database references