6YOP

Structure of SAMM50 LIR bound to GABARAP

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.10 Å
  • R-Value Free: 0.159 
  • R-Value Work: 0.138 
  • R-Value Observed: 0.139 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history. 


Literature

Structure of SAMM50 LIR bound to GABARAP

Mouilleron, S., Wenxin, Z., Johansen, T., Tooze, S., Abudu, Y.P., Lamark, T.

To be published.

Macromolecules
Find similar proteins by: 
(by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Sorting and assembly machinery component 50 homolog,Gamma-aminobutyric acid receptor-associated protein135Homo sapiensMutation(s): 0 
Gene Names: SAMM50, SAM50, CGI-51, TRG3, GABARAP, FLC3B, HT004
UniProt & NIH Common Fund Data Resources
Find proteins for Q9Y512 (Homo sapiens)
Explore Q9Y512 
Go to UniProtKB:  Q9Y512
PHAROS:  Q9Y512
GTEx:  ENSG00000100347 
Find proteins for O95166 (Homo sapiens)
Explore O95166 
Go to UniProtKB:  O95166
PHAROS:  O95166
GTEx:  ENSG00000170296 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupsO95166Q9Y512
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.10 Å
  • R-Value Free: 0.159 
  • R-Value Work: 0.138 
  • R-Value Observed: 0.139 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 101.323α = 90
b = 101.323β = 90
c = 101.323γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXrefinement
xia2data reduction
Aimlessdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



View more in-depth experimental data
Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-04-28
    Type: Initial release
  • Version 1.1: 2024-01-24
    Changes: Advisory, Data collection, Database references, Refinement description