6XOW

CryoEM structure of human presequence protease in partial close state 2, induced by presequence of citrate synthase

PDB DOI: https://doi.org/10.2210/pdb6XOW/pdb
EM Map EMD-22282: EMDB EMDataResource

Classification: HYDROLASE
Organism(s): Homo sapiens
Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
Mutation(s): No

Deposited: 2020-07-07 Released: 2021-07-07
Deposition Author(s): Liang, W.G., Tang, W.
Funding Organization(s): National Institutes of Health/National Institute on Aging (NIH/NIA)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 4.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

CryoEM structure of human presequence protease in partial open state 2, induced by presequence of citrate synthase

Liang, W.G., Zhao, M., Tang, W.

To be published.

Macromolecule Content

Total Structure Weight: 114.9 kDa
Atom Count: 7,711
Modelled Residue Count: 966
Deposited Residue Count: 1,014
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Presequence protease, mitochondrial	A	1,014	Homo sapiens	Mutation(s): 0 Gene Names: PITRM1, KIAA1104, MP1, PREP EC: 3.4.24
UniProt & NIH Common Fund Data Resources
Find proteins for Q5JRX3 (Homo sapiens) Explore Q5JRX3 Go to UniProtKB: Q5JRX3
PHAROS: Q5JRX3 GTEx: ENSG00000107959
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q5JRX3
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 4.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2021-07-07

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute on Aging (NIH/NIA)	United States	R01 GM121964

Revision History (Full details and data files)

Version 1.0: 2021-07-07
Type: Initial release
Version 1.1: 2024-03-06
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.