Structural basis of seamless excision and specific targeting by piggyBac transposase
Chen, Q., Luo, W., Veach, R.A., Hickman, A.B., Wilson, M.H., Dyda, F.(2020) Nat Commun 11: 3446-3446
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
(2020) Nat Commun 11: 3446-3446
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Transposase | A [auth C], B [auth D] | 594 | Trichoplusia ni | Mutation(s): 1  | |
UniProt | |||||
Find proteins for Q283G1 (Trichoplusia ni) Explore Q283G1  Go to UniProtKB:  Q283G1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q283G1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | Organism | Image | |
hairpin DNA | C [auth A], D [auth B] | 74 | Trichoplusia ni | ||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ZN Query on ZN | G [auth C], H [auth C], J [auth D], K [auth D] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N | |||
CA Query on CA | E [auth C], F [auth C], I [auth D], L [auth A] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | RELION | 3.0 |
MODEL REFINEMENT | Rosetta |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK) | United States | DK093660 |