6UK5

Structure of SAM bound CalS10, an amino pentose methyltransferase from Micromonospora echinaspora involved in calicheamicin biosynthesis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.231 
  • R-Value Observed: 0.232 

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Structure of SAM bound CalS10, an amino pentose methyltransferase from Micromonospora echinaspora involved in calicheamicin biosynthesis

Alvarado, S.K.Miller, M.D.Xu, W.Wang, Z.Van Lanen, S.G.Thorson, J.S.Phillips Jr., G.N.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CalS10A, B261Micromonospora echinosporaMutation(s): 0 
Gene Names: calS10
UniProt
Find proteins for Q8KNF4 (Micromonospora echinospora)
Explore Q8KNF4 
Go to UniProtKB:  Q8KNF4
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8KNF4
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.231 
  • R-Value Observed: 0.232 
  • Space Group: P 64
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 133.29α = 90
b = 133.29β = 90
c = 81.76γ = 120
Software Package:
Software NamePurpose
DIALSdata reduction
Aimlessdata scaling
PHASERphasing
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

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Ligand Structure Quality Assessment 


Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM115261
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesR01GM098248
National Science Foundation (NSF, United States)United StatesSTC 1231306

Revision History  (Full details and data files)

  • Version 1.0: 2020-10-07
    Type: Initial release