6UD0 | pdb_00006ud0

Solution-state NMR structural ensemble of human Tsg101 UEV in complex with K63-linked diubiquitin

• PDB DOI: https://doi.org/10.2210/pdb6UD0/pdb
• BMRB: 30675

• Classification: CELL CYCLE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21, Escherichia coli BL21(DE3)
• Mutation(s): Yes 


• Deposited: 2019-09-18 Released: 2021-03-17 
• Deposition Author(s): Strickland, M., Watanabe, S., Bonn, S.M., Camara, C.M., Fushman, D., Carter, C.A., Tjandra, N.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Literature

Tsg101/ESCRT-I Recruitment Regulated by the Dual Binding Modes of K63-Linked Diubiquitin

Strickland, M., Watanabe, S., Bonn, S.M., Camara, C.M., Fushman, D., Carter, C.A., Tjandra, N.

(2021) Structure 

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Hetero 3-mer - A2B1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 33.93 kDa 
• Atom Count: 2,351 
• Modeled Residue Count: 294 
• Deposited Residue Count: 298 
• Unique protein chains: 3

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin	A	76	Homo sapiens	Mutation(s): 1  Gene Names: UBB
UniProt & NIH Common Fund Data Resources
Find proteins for P0CG47 (Homo sapiens) Explore P0CG47  Go to UniProtKB:  P0CG47
PHAROS:  P0CG47 GTEx:  ENSG00000170315

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Ubiquitin	B	77	Homo sapiens	Mutation(s): 1  Gene Names: UBB
UniProt & NIH Common Fund Data Resources
Find proteins for P0CG47 (Homo sapiens) Explore P0CG47  Go to UniProtKB:  P0CG47
PHAROS:  P0CG47 GTEx:  ENSG00000170315

Entity ID: 3
Molecule	Chains	Sequence Length	Organism	Details	Image
Tumor susceptibility gene 101 protein	C	145	Homo sapiens	Mutation(s): 0  Gene Names: TSG101
UniProt & NIH Common Fund Data Resources
Find proteins for Q99816 (Homo sapiens) Explore Q99816  Go to UniProtKB:  Q99816
PHAROS:  Q99816 GTEx:  ENSG00000074319

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the lowest energy 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2021-03-17 
Deposition Author(s): Strickland, M., Watanabe, S., Bonn, S.M., Camara, C.M., Fushman, D., Carter, C.A., Tjandra, N.

Revision History  

• Version 1.0: 2021-03-17
  Type: Initial release
  
• Version 1.1: 2021-09-22
  Changes: Database references
• Version 1.2: 2023-06-14
  Changes: Other
• Version 1.3: 2024-10-16
  Changes: Data collection, Database references, Structure summary