The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
Schormann, N., Deivanayagam, C.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Surface protein adhesin | 425 | Streptococcus mutans | Mutation(s): 0  Gene Names: spaP | ||
UniProt | |||||
Find proteins for P11657 (Streptococcus mutans) Explore P11657  Go to UniProtKB:  P11657 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P11657 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SNZ (Subject of Investigation/LOI) Query on SNZ | F [auth A], I [auth B], M [auth C], R [auth D] | N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]urea C15 H16 N2 O5 XPAUTCCLOUPUGJ-UHFFFAOYSA-N | |||
SO4 (Subject of Investigation/LOI) Query on SO4 | J [auth B], P [auth D] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
EDO (Subject of Investigation/LOI) Query on EDO | K [auth B], O [auth C], T [auth D] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA (Subject of Investigation/LOI) Query on CA | E [auth A], H [auth B], L [auth C], Q [auth D] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
NA (Subject of Investigation/LOI) Query on NA | G [auth A], N [auth C], S [auth D] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 65.81 | α = 90 |
b = 132.697 | β = 90 |
c = 243.819 | γ = 90 |
Software Name | Purpose |
---|---|
Aimless | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
DIALS | data reduction |
PHASER | phasing |