Download MendeleyFirst crystal structure of parasitic PEX14 in complex with a fragment molecule 1H-indole-7-carboxylic acid
Hassaan, E., Heine, A., Klebe, G.To be published.
6S6R
First crystal structure of parasitic PEX14 in complex with a fragment molecule 1H-indole-7-carboxylic acid
- PDB DOI: https://doi.org/10.2210/pdb6S6R/pdb
- Classification: SIGNALING PROTEIN
- Organism(s): Trypanosoma brucei brucei
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2019-07-03 Released: 2020-07-15
- Funding Organization(s): European Commission
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.58 Å
- R-Value Free: 0.235
- R-Value Work: 0.187
- R-Value Observed: 0.190
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Peroxin 14 | 69 | Trypanosoma brucei brucei | Mutation(s): 1 Gene Names: PEX14 |  | |
UniProt | |||||
Find proteins for Q8IEW2 (Trypanosoma brucei brucei) Explore Q8IEW2 Go to UniProtKB: Q8IEW2 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q8IEW2 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| KXQ (Subject of Investigation/LOI) Query on KXQ | E [auth A] | 1~{H}-indole-7-carboxylic acid C9 H7 N O2 IPDOBVFESNNYEE-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | B [auth A], C [auth A], D [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| GOL Query on GOL | F [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| DMS Query on DMS | G [auth A] | DIMETHYL SULFOXIDE C2 H6 O S IAZDPXIOMUYVGZ-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.58 Å
- R-Value Free: 0.235
- R-Value Work: 0.187
- R-Value Observed: 0.190
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 43.306 | α = 90 |
| b = 43.306 | β = 90 |
| c = 80.942 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| PHASER | phasing |
| Coot | model building |
| XDS | data scaling |
| XDS | data reduction |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-07-15 Deposition Author(s): Hassaan, E., Heine, A., Klebe, G.
| Funding Organization | Location | Grant Number |
|---|---|---|
| European Commission | Germany | -- |
Revision History (Full details and data files)
- Version 1.0: 2020-07-15
Type: Initial release
