Biological Assembly 1  

 3D View: Structure | 1D-3D View | Electron Density | Validation Report

Global Symmetry: Cyclic - C2  (3D View)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA,PQS (software)

Macromolecule Content

• Total Structure Weight: 12.58 kDa 
• Atom Count: 929 
• Modelled Residue Count: 115 
• Deposited Residue Count: 115 
• Unique protein chains: 1

6RHN

HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN (HINT) FROM RABBIT WITHOUT NUCLEOTIDE

• PDB DOI: 10.2210/pdb6RHN/pdb

• Classification: NUCLEOTIDE-BINDING PROTEIN
• Organism(s): Oryctolagus cuniculus
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 1997-02-27 Released: 1997-06-16 
• Deposition Author(s): Brenner, C., Garrison, P., Gilmour, J., Peisach, D., Ringe, D., Petsko, G.A., Lowenstein, J.M.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.263 
• R-Value Work: 0.176 
• R-Value Observed: 0.176 

Literature

Crystal structures of HINT demonstrate that histidine triad proteins are GalT-related nucleotide-binding proteins.

Brenner, C., Garrison, P., Gilmour, J., Peisach, D., Ringe, D., Petsko, G.A., Lowenstein, J.M.

(1997) Nat Struct Biol 4: 231-238

• PubMed: 9164465 
• DOI: 10.1038/nsb0397-231
• Primary Citation of Related Structures:  
  3RHN, 4RHN, 5RHN, 6RHN


• PubMed Abstract: 
  

Histidine triad nucleotide-binding protein (HINT), a dimeric purine nucleotide-binding protein from rabbit heart, is a member of the HIT (histidine triad) superfamily which includes HINT homologues and FHIT (HIT protein encoded at the chromosome 3 fragile site) homologues. Crystal structures of HINT-nucleotide complexes demonstrate that the most conserved residues in the superfamily mediate nucleotide binding and that the HIT motif forms part of the phosphate binding loop. Galactose-1-phosphate uridylyltransferase, whose deficiency causes galactosemia, contains tandem HINT domains with the same fold and mode of nucleotide binding as HINT despite having no overall sequence similarity. Features of FHIT, a diadenosine polyphosphate hydrolase and candidate tumour suppressor, are predicted from HINT-nucleotide structures.

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Organizational Affiliation: 

Department of Biochemistry, Brandeis University, Waltham, Massachusetts 02254, USA. [e-mail]

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN	A	115	Oryctolagus cuniculus	Mutation(s): 0  Gene Names: HINT, HINT1 EC: 3.9.1 (UniProt), 3.4.22 (UniProt)
UniProt
Find proteins for P80912 (Oryctolagus cuniculus) Explore P80912  Go to UniProtKB:  P80912

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.15 Å
• R-Value Free: 0.263 
• R-Value Work: 0.176 
• R-Value Observed: 0.176 
• Space Group: P 4₃ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 40.34	α = 90
b = 40.34	β = 90
c = 143.03	γ = 90

Software Package:

Software Name	Purpose
X-PLOR	model building
X-PLOR	refinement
XDS	data reduction
XDS	data scaling
X-PLOR	phasing

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 1997-02-27 
• Released Date: 1997-06-16 
Deposition Author(s): Brenner, C., Garrison, P., Gilmour, J., Peisach, D., Ringe, D., Petsko, G.A., Lowenstein, J.M.

Revision History  

• Version 1.0: 1997-06-16
  Type: Initial release
  
• Version 1.1: 2008-03-25
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Derived calculations, Version format compliance