6QMB

Cryo-EM structure of calcium-bound nhTMEM16 lipid scramblase in nanodisc (closed state)


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Stepwise activation mechanism of the scramblase nhTMEM16 revealed by cryo-EM.

Kalienkova, V.Clerico Mosina, V.Bryner, L.Oostergetel, G.T.Dutzler, R.Paulino, C.

(2019) Elife 8: --


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Predicted protein
A, B
735Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI)Mutation(s): 0 
Find proteins for C7Z7K1 (Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI))
Go to UniProtKB:  C7Z7K1
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CA
Query on CA

Download SDF File 
Download CCD File 
A, B
CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.6 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
European Research CouncilSwitzerland339116, AnoBest.
Netherlands Organisation for Scientific ResearchNetherlands740.018.016

Revision History 

  • Version 1.0: 2019-03-06
    Type: Initial release
  • Version 1.1: 2019-03-20
    Type: Author supporting evidence, Data collection