6M6G

Structure of HSV2 viron capsid portal vertex


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.39 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structures of the portal vertex reveal essential protein-protein interactions for Herpesvirus assembly and maturation.

Wang, N.Chen, W.Zhu, L.Zhu, D.Feng, R.Wang, J.Zhu, B.Zhang, X.Chen, X.Liu, X.Yan, R.Ni, D.Zhou, G.G.Liu, H.Rao, Z.Wang, X.

(2020) Protein Cell 11: 366-373


Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Major capsid protein1,374Human alphaherpesvirus 2Mutation(s): 0 
UniProt
Find proteins for P89442 (Human herpesvirus 2 (strain HG52))
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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
Small capsomere-interacting protein112Human alphaherpesvirus 2Mutation(s): 0 
UniProt
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Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
Triplex capsid protein 2H [auth K],
K [auth O]
318Human alphaherpesvirus 2Mutation(s): 0 
UniProt
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Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
coiled coilsI [auth L]84Human alphaherpesvirus 2Mutation(s): 0 
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Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
Coiled coilsL [auth P]87Human alphaherpesvirus 2Mutation(s): 0 
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Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
Triplex capsid protein 1N [auth S]466Human alphaherpesvirus 2Mutation(s): 0 
UniProt
Find proteins for P22486 (Human herpesvirus 2 (strain G))
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Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
Capsid vertex component 1R [auth k]702Human alphaherpesvirus 2Mutation(s): 0 
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Entity ID: 8
MoleculeChainsSequence LengthOrganismDetailsImage
Capsid vertex component 2S [auth l],
T [auth m]
585Human alphaherpesvirus 2Mutation(s): 0 
UniProt
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Entity ID: 9
MoleculeChainsSequence LengthOrganismDetailsImage
Large tegument protein deneddylaseU [auth n],
V [auth o]
3,122Human alphaherpesvirus 2Mutation(s): 0 
EC: 3.4.19.12 (PDB Primary Data), 3.4.22 (PDB Primary Data)
UniProt
Find proteins for P89459 (Human herpesvirus 2 (strain HG52))
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Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 5.39 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2021-03-24
    Type: Initial release