6M23
Overall structure of KCC2
- PDB DOI: https://doi.org/10.2210/pdb6M23/pdb
- EM Map EMD-30061: EMDB EMDataResource
- Classification: MEMBRANE PROTEIN
- Organism(s): Homo sapiens
- Expression System: Homo sapiens
- Mutation(s): No 
- Membrane Protein: Yes  OPMPDBTMMemProtMDmpstruc
- Deposited: 2020-02-26 Released: 2020-11-04 
- Funding Organization(s): National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.20 Å
- Aggregation State: PARTICLE 
- Reconstruction Method: SINGLE PARTICLE 
wwPDB Validation   3D Report Full Report
This is version 1.1 of the entry. See complete history. 
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Solute carrier family 12 member 5 | 1,129 | Homo sapiens | Mutation(s): 0  Gene Names: KCC2 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q9H2X9 (Homo sapiens) Explore Q9H2X9  Go to UniProtKB:  Q9H2X9 | |||||
PHAROS:  Q9H2X9 GTEx:  ENSG00000124140  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9H2X9 | ||||
Sequence AnnotationsExpand | |||||
|
Oligosaccharides
Small Molecules
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | K [auth A], N [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
K Query on K | I [auth A], L [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | |||
CL Query on CL | J [auth A], M [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
TPO Query on TPO | A, B | L-PEPTIDE LINKING | C4 H10 N O6 P | THR |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.20 Å
- Aggregation State: PARTICLE 
- Reconstruction Method: SINGLE PARTICLE 
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | RELION | 3.0.6 |
Entry History & Funding Information
Deposition Data
- Released Date: 2020-11-04  Deposition Author(s): Chi, X.M., Li, X.R., Chen, Y., Zhang, Y.Y., Su, Q., Zhou, Q.
Funding Organization | Location | Grant Number |
---|---|---|
National Natural Science Foundation of China (NSFC) | China | 31971123 |
National Natural Science Foundation of China (NSFC) | China | 81920108015 |
National Natural Science Foundation of China (NSFC) | China | 31930059 |
Revision History (Full details and data files)
- Version 1.0: 2020-11-04
Type: Initial release - Version 1.1: 2021-05-19
Changes: Database references