Download MendeleyStructure of the mannose transporter of the bacterial phosphotransferase system.
Liu, X., Zeng, J., Huang, K., Wang, J.(2019) Cell Res 29: 680-682
- PubMed: 31209249
- DOI: 10.1038/s41422-019-0194-z
- Primary Citation of Related Structures:
6K1H
6K1H
Structure of membrane protein
- PDB DOI: 10.2210/pdb6K1H/pdb
- EM Map EMD-9906: EMDB EMDataResource
- Classification: PROTEIN TRANSPORT
- Organism(s): Escherichia coli str. K-12 substr. MG1655, Escherichia coli K-12
- Expression System: Escherichia coli 'BL21-Gold(DE3)pLysS AG
- Mutation(s): No
- Membrane Protein: Yes OPMPDBTMMemProtMDmpstruc
- Deposited: 2019-05-10 Released: 2019-07-10
- Funding Organization(s): Ministry of Science and Technology (MoST, China), National Natural Science Foundation of China (NSFC)
Experimental Data Snapshot
- Method: ELECTRON MICROSCOPY
- Resolution: 3.52 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
wwPDB Validation 3D Report Full Report
This is version 2.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PTS mannose transporter subunit IID | E [auth C], C [auth F], A [auth Z] | 283 | Escherichia coli str. K-12 substr. MG1655 | Mutation(s): 0 Gene Names: D8B36_09735 Membrane Entity: Yes |  |
UniProt | |||||
Find proteins for P69805 (Escherichia coli (strain K12)) Explore P69805 Go to UniProtKB: P69805 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69805 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| PTS system mannose-specific EIIC component | F [auth B], D [auth E], B [auth Y] | 274 | Escherichia coli K-12 | Mutation(s): 0 Gene Names: manY, pel, ptsP, b1818, JW1807 Membrane Entity: Yes |  |
UniProt | |||||
Find proteins for P69801 (Escherichia coli (strain K12)) Explore P69801 Go to UniProtKB: P69801 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P69801 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MAN (Subject of Investigation/LOI) Query on MAN | G [auth Z], H [auth F], I [auth C] | alpha-D-mannopyranose C6 H12 O6 WQZGKKKJIJFFOK-PQMKYFCFSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: ELECTRON MICROSCOPY
- Resolution: 3.52 Å
- Aggregation State: PARTICLE
- Reconstruction Method: SINGLE PARTICLE
Entry History & Funding Information
Deposition Data
- Released Date: 2019-07-10 Deposition Author(s): Wang, J.W., Zeng, J.W.
| Funding Organization | Location | Grant Number |
|---|---|---|
| Ministry of Science and Technology (MoST, China) | China | No. 2016YFA0501103 |
| Ministry of Science and Technology (MoST, China) | China | 2015CB910104 |
| National Natural Science Foundation of China (NSFC) | China | 31621092 |
Revision History (Full details and data files)
- Version 1.0: 2019-07-10
Type: Initial release - Version 1.1: 2019-07-17
Changes: Data collection, Database references - Version 1.2: 2019-08-14
Changes: Data collection, Database references - Version 1.3: 2020-07-29
Type: Remediation
Reason: Carbohydrate remediation
Changes: Data collection, Derived calculations, Structure summary - Version 2.0: 2020-09-16
Type: Coordinate replacement
Reason: Model orientation/position
Changes: Advisory, Atomic model, Author supporting evidence, Data collection, Database references, Derived calculations, Polymer sequence, Refinement description, Source and taxonomy, Structure summary
