6JP2

Crystal structure of pyrrolysyl-tRNA synthetase from Methanomethylophilus alvus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.272 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.213 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Crystal structure of M. alvus pyrrolysyl-tRNA synthetase at 2.27 Angstroms resolution.

Yanagisawa, T.Kuratani, M.Yokoyama, S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Pyrrolysyl-tRNA synthetase
A, B, C, D
278Methanomethylophilus alvus (strain Mx1201)Mutation(s): 0 
EC: 6.1.1.26
Find proteins for M9SC49 (Methanomethylophilus alvus (strain Mx1201))
Go to UniProtKB:  M9SC49
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.272 Å
  • R-Value Free: 0.257 
  • R-Value Work: 0.213 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 112.380α = 90.00
b = 112.780β = 114.21
c = 107.430γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
XSCALEdata scaling
PHENIXrefinement
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Education, Culture, Sports, Science and Technology (Japan)Japan24550203
Japan Agency for Medical Research and Development (AMED)JapanJP17am0101081

Revision History 

  • Version 1.0: 2019-05-22
    Type: Initial release