6IAQ

Structure of Amine Dehydrogenase from Mycobacterium smegmatis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.202 

Starting Model: experimental
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Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

A family of native amine dehydrogenases for the asymmetric reductive amination of ketones

Mayol, O.Bastard, K.Beloti, L.Frese, A.Turkenburg, J.P.Petit, J.-L.Mariage, A.Debard, A.Pellouin, V.Perret, A.de Berardinis, V.Zaparucha, A.Grogan, G.Vaxelaire-Vergne, C.

(2019) Nat Catal 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Dihydrodipicolinate reductase N-terminus domain-containing protein
A, B, C, D
339Mycolicibacterium smegmatisMutation(s): 0 
Gene Names: dapB_2ERS451418_03299
EC: 1.17.1.8
UniProt
Find proteins for A0A8B4R7U8 (Mycolicibacterium smegmatis)
Explore A0A8B4R7U8 
Go to UniProtKB:  A0A8B4R7U8
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A8B4R7U8
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.91 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.200 
  • R-Value Observed: 0.202 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 51.39α = 90
b = 147.91β = 98.18
c = 97.78γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2019-03-27
    Type: Initial release
  • Version 1.1: 2024-01-24
    Changes: Data collection, Database references, Refinement description