6H26 | pdb_00006h26

Rabbit muscle phosphoglycerate mutase

• PDB DOI: https://doi.org/10.2210/pdb6H26/pdb

• Classification: ISOMERASE
• Organism(s): Oryctolagus cuniculus
• Mutation(s): No 


• Deposited: 2018-07-13 Released: 2019-07-31 
• Deposition Author(s): Wisniewski, J., Barciszewski, J., Jaskolski, M., Rakus, D.
• Funding Organization(s): Polish National Science Centre

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.29 Å
• R-Value Free: 
  0.187 (Depositor), 0.190 (DCC) 
• R-Value Work: 
  0.152 (Depositor), 0.150 (DCC) 
• R-Value Observed: 
  0.152 (Depositor) 

Starting Model: experimental

Literature

Rabbit muscle phosphoglycerate mutase

Wisniewski, J., Barciszewski, J., Jaskolski, M., Rakus, D.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Biological Assembly Evidence: homology

Macromolecule Content 

• Total Structure Weight: 28.87 kDa 
• Atom Count: 2,210 
• Modeled Residue Count: 243 
• Deposited Residue Count: 253 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Phosphoglycerate mutase	A	253	Oryctolagus cuniculus	Mutation(s): 0  EC: 5.4.2.11 (PDB Primary Data), 5.4.2.4 (PDB Primary Data)
UniProt
Find proteins for G1U7S4 (Oryctolagus cuniculus) Explore G1U7S4  Go to UniProtKB:  G1U7S4

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
EDO	B [auth A], C [auth A]	1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N
CL	D [auth A]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.29 Å
• R-Value Free:  0.187 (Depositor), 0.190 (DCC) 
• R-Value Work:  0.152 (Depositor), 0.150 (DCC) 
• R-Value Observed: 0.152 (Depositor) 

Diffraction Data: https://doi.org/10.18150/repod.9330812

Space Group: P 4₁ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 71.308	α = 90
b = 71.308	β = 90
c = 112.48	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2019-07-31 
Deposition Author(s): Wisniewski, J., Barciszewski, J., Jaskolski, M., Rakus, D.

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Funding Organization	Location	Grant Number
Polish National Science Centre	Poland	UMO-2015/19/B/NZ1/00332

Revision History  

• Version 1.0: 2019-07-31
  Type: Initial release
  
• Version 1.1: 2024-01-17
  Changes: Data collection, Database references, Refinement description