6GYO

Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel in complex with cAMP


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.4 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of human HCN4 hyperpolarization-activated cyclic nucleotide-gated ion channel

Shintre, C.A.Pike, A.C.W.Tessitore, A.Young, M.Bushell, S.R.Strain-Damerell, C.Mukhopadhyay, S.Burgess-Brown, N.A.Huiskonen, J.T.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Carpenter, E.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
A, B, C, D
521Homo sapiensMutation(s): 0 
Gene Names: HCN4
Find proteins for Q9Y3Q4 (Homo sapiens)
Go to Gene View: HCN4
Go to UniProtKB:  Q9Y3Q4
Small Molecules
Ligands 5 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PC1
Query on PC1

Download SDF File 
Download CCD File 
A, B, C, D
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
3-SN-PHOSPHATIDYLCHOLINE
C44 H88 N O8 P
NRJAVPSFFCBXDT-HUESYALOSA-N
 Ligand Interaction
UNX
Query on UNX

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Download CCD File 
A, B, C, D
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
PIE
Query on PIE

Download SDF File 
Download CCD File 
A, B, C, D
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOINOSITOL
C43 H80 O13 P
PDLAMJKMOKWLAJ-OJERQSHOSA-M
 Ligand Interaction
3PE
Query on 3PE

Download SDF File 
Download CCD File 
A, B, C, D
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
3-SN-PHOSPHATIDYLETHANOLAMINE
C41 H82 N O8 P
LVNGJLRDBYCPGB-LDLOPFEMSA-N
 Ligand Interaction
CMP
Query on CMP

Download SDF File 
Download CCD File 
A, B, C, D
ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE
CYCLIC AMP; CAMP
C10 H12 N5 O6 P
IVOMOUWHDPKRLL-KQYNXXCUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 3.4 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
Software Package:
Software NamePurpose
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom106169/Z/14/Z
European CommissionUnited KingdomIMI 115766

Revision History 

  • Version 1.0: 2019-05-01
    Type: Initial release