The structure of thiocyanate dehydrogenase from Thioalkalivibrio paradoxus complex with CU(I) ions.
Polyakov, K.M., Tsallagov, S.I., Tikhkonova, T.V., Popov, V.O.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
thiocyanate dehydrogenase | 467 | Thioalkalivibrio paradoxus ARh 1 | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for W0DP94 (Thioalkalivibrio paradoxus ARh 1) Explore W0DP94  Go to UniProtKB:  W0DP94 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | W0DP94 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CU Query on CU | AA [auth D] BA [auth D] CA [auth D] DA [auth D] E [auth A] | COPPER (II) ION Cu JPVYNHNXODAKFH-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
CSD Query on CSD | A, B, C, D | L-PEPTIDE LINKING | C3 H7 N O4 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 90.64 | α = 90 |
b = 162.37 | β = 119.64 |
c = 90.71 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
XDS | data reduction |
XSCALE | data scaling |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Russian Science Foundation | Russian Federation | Grant 14-24-00172 |