Download MendeleyPhosphotriesterase PTE_A53_4
Dym, O., Aggarwal, N., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Leader, H., Ashani, Y., Goldsmith, M., Greisen, P., Tawfik, D., Sussman, L.J.To be published.
6FU6
Phosphotriesterase PTE_C23_2
- PDB DOI: 10.2210/pdb6FU6/pdb
- Classification: HYDROLASE
- Organism(s): Brevundimonas diminuta
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2018-02-26 Released: 2019-03-20
- Funding Organization(s): DTRA
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.199
- R-Value Work: 0.156
- R-Value Observed: 0.158
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Parathion hydrolase | A, B | 332 | Brevundimonas diminuta | Mutation(s): 0 Gene Names: opd EC: 3.1.8.1 |  |
UniProt | |||||
Find proteins for P0A434 (Brevundimonas diminuta) Explore P0A434 Go to UniProtKB: P0A434 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0A434 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| TA8 Query on TA8 | F [auth A], K [auth B] | POLYACRYLIC ACID C12 H18 O8 UEYGDIASMOPQFG-FXQIFTODSA-N |  | Ligand Interaction | |
| ZN Query on ZN | D [auth A], E [auth A], G [auth B], I [auth B], J [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | Ligand Interaction | |
| FMT Query on FMT | C [auth A], H [auth B] | FORMIC ACID C H2 O2 BDAGIHXWWSANSR-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.95 Å
- R-Value Free: 0.199
- R-Value Work: 0.156
- R-Value Observed: 0.158
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 54.66 | α = 90 |
| b = 81.16 | β = 94.83 |
| c = 70.66 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-3000 | data reduction |
| SCALA | data scaling |
| PHASER | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2019-03-20 Deposition Author(s): Dym, O., Aggarwal, N., Albeck, S., Unger, T., Hamer Rogotner, S., Silman, I., Leader, H., Ashani, Y., Goldsmith, M., Greisen, P., Tawfik, D., Sussman, L.J.
| Funding Organization | Location | Grant Number |
|---|---|---|
| DTRA | United States | HDTRA1-11-C-0026). |
| DTRA | United States | CB10265 / HDTRA1724528 |
Revision History (Full details and data files)
- Version 1.0: 2019-03-20
Type: Initial release
