6EX3

Staphylococcus aureus superoxide dismutase SodA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.201 
  • R-Value Observed: 0.204 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

An evolutionary path to altered cofactor specificity in a metalloenzyme

Barwinska-Sendra, A.Garcia, Y.M.Sendra, K.Basle, A.Mackenzie, E.S.Tarrant, E.Card, P.Tabares, L.C.Bicep, C.Un, S.Kehl-Fie, T.E.Waldron, K.J.

(2020) Nat Commun 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Superoxide dismutaseA, B, C, D199Staphylococcus aureusMutation(s): 0 
Gene Names: sodABER48_001496BN1321_260190CEJ93_06715ERS072738_01312ERS072840_00871ERS073583_00205ERS074020_01135HMPREF3211_01704
EC: 1.15.1.1
UniProt
Find proteins for P0A0J3 (Staphylococcus aureus (strain NCTC 8325 / PS 47))
Explore P0A0J3 
Go to UniProtKB:  P0A0J3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP0A0J3
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.20 Å
  • R-Value Free: 0.267 
  • R-Value Work: 0.201 
  • R-Value Observed: 0.204 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 47.557α = 90
b = 66.381β = 98.72
c = 108.311γ = 90
Software Package:
Software NamePurpose
GDAdata collection
XDSdata reduction
Aimlessdata scaling
MOLREPphasing
Cootmodel building
REFMACrefinement

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research CouncilUnited Kingdom--
Wellcome TrustUnited Kingdom098375/Z/12/Z

Revision History  (Full details and data files)

  • Version 1.0: 2018-11-21
    Type: Initial release
  • Version 1.1: 2020-06-10
    Changes: Database references