6DS8

Crystal structure of MhuD R26S mutant with two Manganese protoporphyrin IX bound per active site


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.187 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Crystal structure of MhuD R26S mutant with two Manganese protoporphyrin IX bound per active site

Chao, A.Goulding, C.W.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Heme-degrading monooxygenase HmoBA, B99Mycobacterium tuberculosis H37RvMutation(s): 1 
Gene Names: mhuDRv3592
EC: 1.14.14.18 (PDB Primary Data), 1.14.99.57 (UniProt)
Find proteins for P9WKH3 (Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv))
Explore P9WKH3 
Go to UniProtKB:  P9WKH3
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MNH
Query on MNH

Download CCD File 
A, B
MANGANESE PROTOPORPHYRIN IX
C34 H32 Mn N4 O4
UIBYYPDLEONCGQ-RGGAHWMASA-L
 Ligand Interaction
CL
Query on CL

Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.181 
  • R-Value Observed: 0.187 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 39.02α = 90
b = 68.701β = 90
c = 74.49γ = 90
Software Package:
Software NamePurpose
Blu-Icedata collection
MOSFLMdata reduction
pointlessdata scaling
Aimlessdata scaling
PHENIXphasing
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, United States)United StatesDGE-1321846
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United StatesAI095208

Revision History 

  • Version 1.0: 2019-06-19
    Type: Initial release
  • Version 1.1: 2019-11-27
    Changes: Author supporting evidence