6DBF

Crystal Structure of VHH R303 in complex with InlB-LRR


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.163 
  • R-Value Work: 0.138 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Structural basis of VHH-mediated neutralization of the food-borne pathogenListeria monocytogenes.

King, M.T.Huh, I.Shenai, A.Brooks, T.M.Brooks, C.L.

(2018) J. Biol. Chem. 293: 13626-13635


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Listeria virulence factor InlB
A
229Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)Mutation(s): 0 
Gene Names: inlB
Find proteins for P25147 (Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e))
Go to UniProtKB:  P25147
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
InlB specific VHH R303
B
142N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.163 
  • R-Value Work: 0.138 
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 82.964α = 90.00
b = 82.964β = 90.00
c = 64.216γ = 90.00
Software Package:
Software NamePurpose
PHENIXphasing
PDB_EXTRACTdata extraction
xia2data scaling
PHENIXrefinement
xia2data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical SciencesUnited StatesSC3GM112532

Revision History 

  • Version 1.0: 2018-07-18
    Type: Initial release
  • Version 1.1: 2018-07-25
    Type: Data collection, Database references
  • Version 1.2: 2018-09-12
    Type: Data collection, Database references, Source and taxonomy