6CXM

Crystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.253 
  • R-Value Work: 0.197 
  • R-Value Observed: 0.203 

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Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of a dihydrofolate reductase from Mycobacterium smegmatis in complex with NADP and P218

Edwards, T.E.Abendroth, J.Lorimer, D.D.Horanyi, P.S.Seattle Structural Genomics Center for Infectious Disease

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Dihydrofolate reductaseA, B164Mycolicibacterium smegmatis MC2 155Mutation(s): 0 
Gene Names: folAMSMEI_2607
EC: 1.5.1.3
UniProt
Find proteins for I7FC10 (Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155))
Explore I7FC10 
Go to UniProtKB:  I7FC10
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAP (Subject of Investigation/LOI)
Query on NAP

Download Ideal Coordinates CCD File 
C [auth A], E [auth B]NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
 Ligand Interaction
MMV (Subject of Investigation/LOI)
Query on MMV

Download Ideal Coordinates CCD File 
D [auth A], F [auth B]3-(2-{3-[(2,4-diamino-6-ethylpyrimidin-5-yl)oxy]propoxy}phenyl)propanoic acid
C18 H24 N4 O4
VDGXZSSDCDPCRF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

Unit Cell:
Length ( Å )Angle ( ˚ )
a = 63.25α = 90
b = 40.3β = 93.86
c = 67.22γ = 90
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
PHENIXrefinement
PDB_EXTRACTdata extraction
MOLREPphasing

Structure Validation

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Ligand Structure Quality Assessment  



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2018-04-11
    Type: Initial release