6C6M

IgCam3 of human MLCK1

  • Classification: CELL ADHESION
  • Organism(s): Homo sapiens
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2018-01-19 Released: 2019-01-23 
  • Deposition Author(s): Zuccola, H.J., Turner, J.
  • Funding Organization(s): National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.226 
  • R-Value Observed: 0.228 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Intracellular MLCK1 diversion reverses barrier loss to restore mucosal homeostasis.

Graham, W.V.He, W.Marchiando, A.M.Zha, J.Singh, G.Li, H.S.Biswas, A.Ong, M.L.D.M.Jiang, Z.H.Choi, W.Zuccola, H.Wang, Y.Griffith, J.Wu, J.Rosenberg, H.J.Wang, Y.Snapper, S.B.Ostrov, D.Meredith, S.C.Miller, L.W.Turner, J.R.

(2019) Nat Med 25: 690-700

  • DOI: https://doi.org/10.1038/s41591-019-0393-7
  • Primary Citation of Related Structures:  
    6C6M

  • PubMed Abstract: 

    Epithelial barrier loss is a driver of intestinal and systemic diseases. Myosin light chain kinase (MLCK) is a key effector of barrier dysfunction and a potential therapeutic target, but enzymatic inhibition has unacceptable toxicity. Here, we show that a unique domain within the MLCK splice variant MLCK1 directs perijunctional actomyosin ring (PAMR) recruitment. Using the domain structure and multiple screens, we identify a domain-binding small molecule (divertin) that blocks MLCK1 recruitment without inhibiting enzymatic function. Divertin blocks acute, tumor necrosis factor (TNF)-induced MLCK1 recruitment as well as downstream myosin light chain (MLC) phosphorylation, barrier loss, and diarrhea in vitro and in vivo. Divertin corrects barrier dysfunction and prevents disease development and progression in experimental inflammatory bowel disease. Beyond applications of divertin in gastrointestinal disease, this general approach to enzymatic inhibition by preventing access to specific subcellular sites provides a new paradigm for safely and precisely targeting individual properties of enzymes with multiple functions.


  • Organizational Affiliation

    Department of Pathology, University of Chicago, Chicago, IL, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Myosin light chain kinase, smooth muscle
A, B, C
103Homo sapiensMutation(s): 0 
Gene Names: MYLKMLCKMLCK1MYLK1
EC: 2.7.11.18
UniProt & NIH Common Fund Data Resources
Find proteins for Q15746 (Homo sapiens)
Explore Q15746 
Go to UniProtKB:  Q15746
PHAROS:  Q15746
GTEx:  ENSG00000065534 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ15746
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.226 
  • R-Value Observed: 0.228 
  • Space Group: P 65
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 74.693α = 90
b = 74.693β = 90
c = 131.481γ = 120
Software Package:
Software NamePurpose
BUSTERrefinement
XDSdata reduction
autoPROCdata scaling
BUSTERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)United StatesR01DK61931
National Institutes of Health/National Institute of Diabetes and Digestive and Kidney Disease (NIH/NIDDK)United StatesR01DK068271

Revision History  (Full details and data files)

  • Version 1.0: 2019-01-23
    Type: Initial release
  • Version 1.1: 2019-08-07
    Changes: Data collection, Database references
  • Version 1.2: 2019-12-25
    Changes: Author supporting evidence
  • Version 1.3: 2024-03-06
    Changes: Data collection, Database references, Refinement description