6BLJ

Crystal structure of cytoplasmic Serine-tRNA ligase from Naegleria fowleri in complex with AMP


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.158 
  • R-Value Observed: 0.159 

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Ligand Structure Quality Assessment 


This is version 2.0 of the entry. See complete history


Literature

Crystal structure of cytoplasmic Serine-tRNA ligase from Neisseria fowlerii in complex with AMP

Abendroth, J.Lorimer, D.D.Edwards, T.E.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Serine-tRNA ligaseA, B, C485Naegleria fowleriMutation(s): 0 
Gene Names: Nfow_scaffold00184
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Protein Feature View
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  • Reference Sequence
Small Molecules
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.158 
  • R-Value Observed: 0.159 
  • Space Group: P 31 2 1
  • Diffraction Data DOI: 10.18430/M36BLJ
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 168.19α = 90
b = 168.19β = 90
c = 111.5γ = 120
Software Package:
Software NamePurpose
XDSdata reduction
XSCALEdata scaling
MoRDaphasing
Cootmodel building
PHENIXrefinement
PDB_EXTRACTdata extraction

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2017-12-20
    Type: Initial release
  • Version 2.0: 2018-01-10
    Changes: Atomic model, Derived calculations