6BA0

Pyrimidine-specific Ribonucleoside Hydrolase from Gardnerella vaginalis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Pyrimidine-specific Ribonucleoside Hydrolase RihB from Gardnerella vaginalis

Renner, N.Jacques, D.A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Cytidine/uridine-specific hydrolaseA, B, C, D315Gardnerella vaginalis 315-AMutation(s): 0 
Gene Names: rihAHMPREF9435_0920
EC: 3.2
UniProt
Find proteins for F5LUB1 (Gardnerella vaginalis 315-A)
Explore F5LUB1 
Go to UniProtKB:  F5LUB1
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.218 
  • R-Value Work: 0.186 
  • R-Value Observed: 0.188 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 83.07α = 90
b = 79.36β = 99.62
c = 115.99γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
Blu-Icedata collection
Aimlessdata scaling
PHASERphasing
PDB_EXTRACTdata extraction
MOSFLMdata reduction

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Health and Medical Research Council (NHMRC, Australia)AustraliaGNT1036521

Revision History  (Full details and data files)

  • Version 1.0: 2018-10-17
    Type: Initial release
  • Version 1.1: 2019-02-20
    Changes: Author supporting evidence, Data collection
  • Version 1.2: 2020-01-08
    Changes: Author supporting evidence