6ASL

Crystal Structure of Flavin monooxygenase CmoJ (earlier YtnJ) bound with FMN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.172 
  • R-Value Observed: 0.173 

wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.0 of the entry. See complete history


Literature

Flavin mediated Pummerer type rearrangement in cysteine salvage pathway

Bhandari, D.M.Krishnamoorthy, K.Zhao, B.Li, P.Begley, T.P.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Putative monooxygenase MoxCA444Bacillus subtilis subsp. subtilis str. 168Mutation(s): 0 
Gene Names: moxCytnJBSU29310
EC: 1.14
UniProt
Find proteins for O34974 (Bacillus subtilis (strain 168))
Explore O34974 
Go to UniProtKB:  O34974
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FMN (Subject of Investigation/LOI)
Query on FMN

Download Ideal Coordinates CCD File 
B [auth A]FLAVIN MONONUCLEOTIDE
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
 Ligand Interaction
LFN (Subject of Investigation/LOI)
Query on LFN

Download Ideal Coordinates CCD File 
C [auth A]LUMIFLAVIN
C13 H12 N4 O2
KPDQZGKJTJRBGU-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.201 
  • R-Value Work: 0.172 
  • R-Value Observed: 0.173 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 87.079α = 90
b = 87.079β = 90
c = 194.94γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
PHENIXphasing
Cootmodel building
iMOSFLMdata reduction
PHENIXmodel building

Structure Validation

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Ligand Structure Quality Assessment  



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Robert A. Welch FoundationUnited StatesA-0034

Revision History  (Full details and data files)

  • Version 1.0: 2018-09-12
    Type: Initial release